RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	DBX2	Q6ZNG2	339 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	METTL3	Q86U44	580 aa	Known RBP	13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	MARCH9	Q86YJ5	346 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	ZCCHC9	Q8N567	271 aa	Known RBP	13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	KRI1	Q8N9T8	703 aa	Known RBP	13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	ZSWIM2	Q8NEG5	633 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	CADM4	Q8NFZ8	388 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	RHBDD1	Q8TEB9	315 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	SCFD1	Q8WVM8	642 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	OVCA2	Q8WZ82	227 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	TOE1	Q96GM8	510 aa	Known RBP	13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	STRA6	Q9BX79	667 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	ELOVL4	Q9GZR5	314 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	SLC6A17	Q9H1V8	727 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	PRDM16	Q9HAZ2	1276 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	MTMR6	Q9Y217	621 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	FNDC3A	Q9Y2H6	1198 aa	Known RBP	13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	KNL1	Q8NG31	2342 aa		13.98	□□□□□ -0.17
SNHG17-208	ENST00000456953	SHROOM3	Q8TF72	1996 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953		E9PAM4	449 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	BCAT2	O15382	392 aa	Predicted RBP	13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	CACNG3	O60359	315 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	ZSCAN22	P10073	491 aa	Predicted RBP	13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	NCAM1	P13591	858 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	GART	P22102	1010 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	YWHAQ	P27348	245 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	TUB	P50607	506 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	SMAD1	Q15797	465 aa	Known RBP	13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	HLA-B	Q31612	363 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	MDH1B	Q5I0G3	518 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	HS2ST1	Q7LGA3	356 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	SFR1	Q86XK3	245 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	RASSF8	Q8NHQ8	419 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	ERLEC1	Q96DZ1	483 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	ACCS	Q96QU6	501 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	XPO6	Q96QU8	1125 aa	Known RBP	13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	MIR1-1HG	Q9H1L0	117 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	PDE11A	Q9HCR9	933 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	USP36	Q9P275	1121 aa	Known RBP	13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	SEL1L	Q9UBV2	794 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	RAD54B	Q9Y620	910 aa		13.97	□□□□□ -0.17
SNHG17-208	ENST00000456953	CABIN1	Q9Y6J0	2220 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	HECTD1	Q9ULT8	2610 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	MYO18B	Q8IUG5	2567 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	PTPRQ	Q9UMZ3	2332 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	RTN3	O95197	1032 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	PLA2G2A	P14555	144 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	DDIT3	P35638	169 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	CACNA2D1	P54289	1103 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	KCNA1	Q09470	495 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	IFRD2	Q12894	506 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	PKP1	Q13835	747 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	SUZ12	Q15022	739 aa	Known RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	L1TD1	Q5T7N2	865 aa	Known RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	SNX30	Q5VWJ9	437 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	NUP93	Q8N1F7	819 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	LSM14A	Q8ND56	463 aa	Known RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	PIP4K2C	Q8TBX8	421 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	LARP4B	Q92615	738 aa	Known RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	FBXO32	Q969P5	355 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	ANKRD36BP1	Q96IX9	119 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	DCBLD2	Q96PD2	775 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	MMS19	Q96T76	1030 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	GPR174	Q9BXC1	333 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	SNX25	Q9H3E2	840 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	MRPL44	Q9H9J2	332 aa	Known RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	TMEM30A	Q9NV96	361 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	INTS13	Q9NVM9	706 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	WSB2	Q9NYS7	404 aa	Predicted RBP	13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	WDR35	Q9P2L0	1181 aa		13.96	□□□□□ -0.17
SNHG17-208	ENST00000456953	KNTC1	P50748	2209 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	FAM149A	A5PLN7	773 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	GOLGA8IP	A6NC78	632 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	GOLGA8J	A6NMD2	632 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	GOLGA8CP	A6NN73	597 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	PRRT4	C9JH25	899 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	NEDD8-MDP1	E9PL57	170 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	TNFSF14	O43557	240 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	TNNC2	P02585	160 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	TYR	P14679	529 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	OXTR	P30559	389 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	GNL1	P36915	607 aa	Predicted RBP	13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	BNC1	Q01954	994 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	STARD3	Q14849	445 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	DCAF12L1	Q5VU92	463 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	BRAP	Q7Z569	592 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	ZNF605	Q86T29	641 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	BBS2	Q9BXC9	721 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	ZNF518B	Q9C0D4	1074 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	CCSER2	Q9H7U1	834 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	ITM2C	Q9NQX7	267 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	CHMP5	Q9NZZ3	219 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	MARK1	Q9P0L2	795 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	BTBD3	Q9Y2F9	522 aa		13.95	□□□□□ -0.18
SNHG17-208	ENST00000456953	PTPRJ	Q12913	1337 aa		13.94	□□□□□ -0.18
SNHG17-208	ENST00000456953	METTL12	A8MUP2	240 aa		13.94	□□□□□ -0.18
SNHG17-208	ENST00000456953	TACC1	O75410	805 aa		13.94	□□□□□ -0.18
SNHG17-208	ENST00000456953	F13A1	P00488	732 aa		13.94	□□□□□ -0.18

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