RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ATG13O75143 517 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 CDK11BP21127 795 aaKnown RBP24.33■■□□□ 1.49
CBX3-204ENST00000456948 GNA15P30679 374 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 CCR3P51677 355 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 PTK2Q05397 1052 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 ADIGQ0VDE8 80 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 FZD5Q13467 585 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 MEA1Q16626 185 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 FBXO43Q4G163 708 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 PREPLQ4J6C6 727 aaPredicted RBP24.33■■□□□ 1.49
CBX3-204ENST00000456948 FKBP15Q5T1M5 1219 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 TXNDC11Q6PKC3 985 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 ZNF687Q8N1G0 1237 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 RNF139Q8WU17 664 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 SLC35F5Q8WV83 523 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 CD101Q93033 1021 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 SECISBP2LQ93073 1101 aaKnown RBP24.33■■□□□ 1.49
CBX3-204ENST00000456948 ULBP1Q9BZM6 244 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 ZNF510Q9Y2H8 683 aa24.33■■□□□ 1.49
CBX3-204ENST00000456948 COL4A3Q01955 1670 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 OTOL1A6NHN0 477 aaPredicted RBP24.32■■□□□ 1.48
CBX3-204ENST00000456948 THAP12O43422 761 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 FBXO21O94952 628 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 TBX18O95935 607 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 IRF1P10914 325 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 LCP1P13796 627 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 BPIFB4P59827 614 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 ZNF528Q3MIS6 628 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 PKDCCQ504Y2 493 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 TMEM196Q5HYL7 178 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 MIIPQ5JXC2 388 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 HTR3DQ70Z44 454 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 SCD5Q86SK9 330 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 SCML4Q8N228 414 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 ZFRQ96KR1 1074 aaKnown RBP24.32■■□□□ 1.48
CBX3-204ENST00000456948 KLF16Q9BXK1 252 aaPredicted RBP24.32■■□□□ 1.48
CBX3-204ENST00000456948 DCLK3Q9C098 648 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 OSER1Q9NX31 292 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 DNAJC12Q9UKB3 198 aa24.32■■□□□ 1.48
CBX3-204ENST00000456948 CACNA1IQ9P0X4 2223 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 SART1O43290 800 aaKnown RBP24.31■■□□□ 1.48
CBX3-204ENST00000456948 ACADSBP45954 432 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 PGFP49763 221 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 GALK1P51570 392 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 GAD2Q05329 585 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 MTAPQ13126 283 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 DHCR24Q15392 516 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 GJB7Q6PEY0 223 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 SPEM1Q8N4L4 309 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 ZNF606Q8WXB4 792 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 IRGQQ8WZA9 623 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 SHC3Q92529 594 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 ABCC13Q9NSE7 274 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 FANCLQ9NW38 375 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 RASAL2Q9UJF2 1139 aa24.31■■□□□ 1.48
CBX3-204ENST00000456948 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.3■■□□□ 1.48
CBX3-204ENST00000456948 TULP2O00295 520 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 CXCL12P48061 93 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 NRLP54845 237 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 SNX16P57768 344 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 CSTF1Q05048 431 aaKnown RBP24.3■■□□□ 1.48
CBX3-204ENST00000456948 TYRO3Q06418 890 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 EFEMP1Q12805 493 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 CCINQ13939 588 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 CDKAL1Q5VV42 579 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 CAVIN1Q6NZI2 390 aaKnown RBP24.3■■□□□ 1.48
CBX3-204ENST00000456948 NUDT18Q6ZVK8 323 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 MIB1Q86YT6 1006 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 STK32AQ8WU08 396 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 NOX5Q96PH1 765 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 TRIM62Q9BVG3 475 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 FAM126AQ9BYI3 521 aaPredicted RBP24.3■■□□□ 1.48
CBX3-204ENST00000456948 SEMA4AQ9H3S1 761 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 ST7Q9NRC1 585 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 TAB2Q9NYJ8 693 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 MARCH2Q9P0N8 246 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 TMEM63CQ9P1W3 806 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 NUDT5Q9UKK9 219 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 PIEZO1Q92508 2521 aa24.3■■□□□ 1.48
CBX3-204ENST00000456948 RGS7P49802 495 aa24.29■■□□□ 1.48
CBX3-204ENST00000456948 PMF1Q6P1K2 205 aa24.29■■□□□ 1.48
CBX3-204ENST00000456948 VPS16Q9H269 839 aa24.29■■□□□ 1.48
CBX3-204ENST00000456948 CEP83Q9Y592 693 aa24.29■■□□□ 1.48
CBX3-204ENST00000456948 SMTNL1A8MU46 457 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 GFRA3O60609 400 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 CYP17A1P05093 508 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 SP9P0CG40 484 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 ADH5P11766 374 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 KRT9P35527 623 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 EIF2DP41214 584 aaKnown RBP24.28■■□□□ 1.48
CBX3-204ENST00000456948 KRT31Q15323 416 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 BSPRYQ5W0U4 402 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 RHBDF2Q6PJF5 856 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 C11orf57Q6ZUT1 292 aaPredicted RBP24.28■■□□□ 1.48
CBX3-204ENST00000456948 BBS7Q8IWZ6 715 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 ZSWIM1Q9BR11 485 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 DAAM1Q9Y4D1 1078 aa24.28■■□□□ 1.48
CBX3-204ENST00000456948 SCAMP3O14828 347 aaKnown RBP24.27■■□□□ 1.48
CBX3-204ENST00000456948 NBL1P41271 181 aa24.27■■□□□ 1.48
CBX3-204ENST00000456948 GPD2P43304 727 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms