RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 ZIC5Q96T25 663 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 CYLDQ9NQC7 956 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 GNEQ9Y223 722 aaKnown RBP12.94□□□□□ -0.34
LINC00959-201ENST00000456581 WASF2Q9Y6W5 498 aa12.94□□□□□ -0.34
LINC00959-201ENST00000456581 MKI67P46013 3256 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 CCDC195A0A1B0GUA6 201 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 SMAPO00193 183 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 GPR32O75388 356 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 TOP3BO95985 862 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 ERBB2P04626 1255 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 NDST1P52848 882 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 PTPN11Q06124 597 aaPredicted RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 KPNB1Q14974 876 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 RINLQ6ZS11 566 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 HSPH1Q92598 858 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 GRAMD1AQ96CP6 724 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 CLPTM1LQ96KA5 538 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 NME7Q9Y5B8 376 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 A0A1B0GVG6 124 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 SLC15A5A6NIM6 579 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 A6NJR5 290 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 C3orf70A6NLC5 250 aaPredicted RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 CILPO75339 1184 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 GRAP2O75791 330 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 AP1G2O75843 785 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 ZNF865P0CJ78 1059 aaPredicted RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 CYP2C9P11712 490 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 HOXD8P13378 290 aaPredicted RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 SKIV2L2P42285 1042 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 PSMC1P62191 440 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 FKBP1BP68106 108 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 POU5F1BQ06416 359 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 MAP2K5Q13163 448 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 MORF4L2Q15014 288 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 SEPT7Q16181 437 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 CCDC142Q17RM4 750 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 ACSBG2Q5FVE4 666 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 MORN1Q5T089 497 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 CDHR3Q6ZTQ4 885 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 ALYREFQ86V81 257 aaKnown RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 KBTBD2Q8IY47 623 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 AGGF1Q8N302 714 aaeCLIP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 ZFATQ9P243 1243 aa12.93□□□□□ -0.34
LINC00959-201ENST00000456581 MARCOQ9UEW3 520 aaPredicted RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 FARP1Q9Y4F1 1045 aaPredicted RBP12.93□□□□□ -0.34
LINC00959-201ENST00000456581 FAM237BA0A1B0GVD1 139 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 M0QYV0 167 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 MICAL2O94851 1124 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 PSMA2P25787 234 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 CTGFP29279 349 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 PPP1R15BQ5SWA1 713 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 MZB1Q8WU39 189 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 DCAKDQ8WVC6 231 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 RBM41Q96IZ5 413 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 ADPGKQ9BRR6 497 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 GOLGA2P5Q9HBQ8 144 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 NMRK1Q9NWW6 199 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 SMG5Q9UPR3 1016 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 LRCH4O75427 683 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 DCTN3O75935 186 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 CALB1P05937 261 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 MYL3P08590 195 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 KITP10721 976 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 NEFHP12036 1026 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 IGFBP6P24592 240 aaPredicted RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 ALDH3A1P30838 453 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 RGS7P49802 495 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 FOXB2Q5VYV0 432 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 TMEM176AQ96HP8 235 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 MRPL45Q9BRJ2 306 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 ASB7Q9H672 318 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 FAM49BQ9NUQ9 324 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 CACNG4Q9UBN1 327 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 XPO7Q9UIA9 1087 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 PCDHGC3Q9UN70 934 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 LRRC42Q9Y546 428 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 SNX9Q9Y5X1 595 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.92□□□□□ -0.34
LINC00959-201ENST00000456581 COL1A2P08123 1366 aa12.92□□□□□ -0.34
LINC00959-201ENST00000456581 MYADML2A6NDP7 307 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 F5H423 210 aaPredicted RBP12.91□□□□□ -0.34
LINC00959-201ENST00000456581 UGT1A9O60656 530 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 LSM8O95777 96 aaKnown RBP12.91□□□□□ -0.34
LINC00959-201ENST00000456581 F2P00734 622 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 PYGBP11216 843 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 AMPD1P23109 780 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 ELK3P41970 407 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 FAAP100Q0VG06 881 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 RCN1Q15293 331 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 PARP6Q2NL67 630 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 EFHC2Q5JST6 749 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 ISLR2Q6UXK2 745 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 SESTD1Q86VW0 696 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 RASAL3Q86YV0 1011 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 PALM2Q8IXS6 379 aa12.91□□□□□ -0.34
LINC00959-201ENST00000456581 RIBC1Q8N443 379 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms