RNA–Protein interactions for RNA: ENST00000456049.1

VSTM2A-OT1-201, VSTM2A overlapping transcript 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM2A-OT1, Length 3,031 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-OT1-201ENST00000456049 IL9P15248 144 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ATF2P15336 505 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TBXAS1P24557 533 aaPredicted RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 HOXC13P31276 330 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CHRNA3P32297 505 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CTNNB1P35222 781 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SLC11A1P49279 550 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 NDST1P52848 882 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SNRPFP62306 86 aaKnown RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GAD2Q05329 585 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GPS1Q13098 491 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 IFT88Q13099 833 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 P3H1Q32P28 736 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SLC10A6Q3KNW5 377 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PTPN20Q4JDL3 420 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PPP6R3Q5H9R7 873 aaPredicted RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FAXCQ5TGI0 409 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CDCA2Q69YH5 1023 aaPredicted RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 C11orf63Q6NUN7 778 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 C1orf228Q6PIY5 440 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZDHHC24Q6UX98 284 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 NPNTQ6UXI9 565 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MON1BQ7L1V2 547 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CPLX4Q7Z7G2 160 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RFX6Q8HWS3 928 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 WDR49Q8IV35 697 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SCUBE3Q8IX30 993 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RHOT1Q8IXI2 618 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TMEM35BQ8NCS4 154 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SPPL3Q8TCT6 385 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 POF1BQ8WVV4 589 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CD101Q93033 1021 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RPS6KC1Q96S38 1066 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KLF6Q99612 283 aaPredicted RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PLVAPQ9BX97 442 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ELOVL4Q9GZR5 314 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FZD8Q9H461 694 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 VPS37BQ9H9H4 285 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TMBIM4Q9HC24 238 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MRPL47Q9HD33 250 aaKnown RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 AAASQ9NRG9 546 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PARVAQ9NVD7 372 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GRHL1Q9NZI5 618 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CWC15Q9P013 229 aaKnown RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TUBGCP4Q9UGJ1 667 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SIX4Q9UIU6 781 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CPSF3Q9UKF6 684 aaKnown RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MAGED2Q9UNF1 606 aaPredicted RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RRP15Q9Y3B9 282 aaKnown RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 NME7Q9Y5B8 376 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 HEY1Q9Y5J3 304 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PTPRZ1P23471 2315 aaPredicted RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MYO18AQ92614 2054 aaKnown RBP3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ATG2BQ96BY7 2078 aa3.2□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 EBAG9O00559 213 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SPTLC1O15269 473 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MAGEB2O15479 319 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CST8O60676 142 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SPAG7O75391 227 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RFPL2O75678 378 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FGF18O76093 207 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 GAS8O95995 478 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 VIMP08670 466 aaKnown RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 LCP1P13796 627 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KCNA5P22460 613 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ACAT1P24752 427 aaKnown RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 IL1R2P27930 398 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 LSP1P33241 339 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CETN2P41208 172 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ASPAP45381 313 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 BRCC3P46736 316 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ARSEP51690 589 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CLCNKBP51801 687 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ATXN1P54253 815 aaKnown RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ERVK-21P61565 698 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CENPCQ03188 943 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZNF252P-AS1Q0IIN9 211 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 HYAL1Q12794 435 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 IFRD2Q12894 506 aaPredicted RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TMEM132DQ14C87 1099 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 FASTKD3Q14CZ7 662 aaKnown RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 SIX1Q15475 284 aaPredicted RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZKSCAN8Q15776 578 aaPredicted RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 RTP2Q5QGT7 225 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 IZUMO3Q5VZ72 239 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PLPP4Q5VZY2 271 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PRSS55Q6UWB4 352 aaPredicted RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ZPBP2Q6X784 338 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ENOSF1Q7L5Y1 443 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TEX2Q8IWB9 1127 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TTC9BQ8N6N2 239 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 KCTD6Q8NC69 237 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 DYDC1Q8WWB3 177 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CLP1Q92989 425 aaKnown RBP3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 MS4A3Q96HJ5 214 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 CFAP57Q96MR6 1250 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ACAP3Q96P50 834 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 PHF12Q96QT6 1004 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 TMEM209Q96SK2 561 aa3.19□□□□□ -1.9
VSTM2A-OT1-201ENST00000456049 ADPGKQ9BRR6 497 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms