RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 SYCP2LQ5T4T6 812 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 C1orf228Q6PIY5 440 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 ZCCHC23Q6ZST2 131 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 MARVELD2Q8N4S9 558 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 SHKBP1Q8TBC3 707 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 ZFRQ96KR1 1074 aaKnown RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 NLRP4Q96MN2 994 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 CATSPER2Q96P56 530 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 CGRRF1Q99675 332 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 TDRD3Q9H7E2 651 aaKnown RBP14.22□□□□□ -0.13
PTPRE-204ENST00000455661 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 POMPQ9Y244 141 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 DNAJC16Q9Y2G8 782 aa14.22□□□□□ -0.13
PTPRE-204ENST00000455661 KLRG2A4D1S0 409 aaPredicted RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 TTLL13PA6NNM8 815 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 DENRO43583 198 aaKnown RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 CCNE2O96020 404 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 ICAM1P05362 532 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 CD48P09326 243 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 MYCLP12524 364 aaPredicted RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 FDFT1P37268 417 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 YWHAZP63104 245 aaKnown RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 BTKQ06187 659 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SLFN12LQ6IEE8 588 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 DENND5BQ6ZUT9 1274 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 TAS1R3Q7RTX0 852 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 NCAPG2Q86XI2 1143 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 FBXW8Q8N3Y1 598 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 GCNAQ96QF7 691 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 CALN1Q9BXU9 219 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 DHX33Q9H6R0 707 aaKnown RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 NRDE2Q9H7Z3 1164 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 RAB6BQ9NRW1 208 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 PAK5Q9P286 719 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 ARHGAP28Q9P2N2 729 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SERPINA10Q9UK55 444 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SH3BP1Q9Y3L3 701 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SLX4Q8IY92 1834 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 ARHGAP10A1A4S6 786 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 NFIBO00712 420 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 VILLO15195 856 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 DKC1O60832 514 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SIN3BO75182 1162 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 DGAT1O75907 488 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 C1QAP02745 245 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SMIM18P0DKX4 95 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 ALDH1A3P47895 512 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SERPINB9P50453 376 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SCNN1BP51168 640 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 HPCAP84074 193 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 MTMR2Q13614 643 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 CYLC2Q14093 348 aaPredicted RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 STRIP1Q5VSL9 837 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 OLFML2BQ68BL8 750 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 FBXL19Q6PCT2 694 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 DEFB107AQ8IZN7 70 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 RDM1Q8NG50 284 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 PPP4R1Q8TF05 950 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 MRPS26Q9BYN8 205 aaKnown RBP14.21□□□□□ -0.13
PTPRE-204ENST00000455661 RSAD1Q9HA92 442 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 HSFX1Q9UBD0 423 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 INPP5FQ9Y2H2 1132 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 PCDHA10Q9Y5I2 948 aa14.21□□□□□ -0.13
PTPRE-204ENST00000455661 SF3B1O75533 1304 aaKnown RBP eCLIP14.21□□□□□ -0.14
PTPRE-204ENST00000455661 ZNF541Q9H0D2 1346 aa14.21□□□□□ -0.14
PTPRE-204ENST00000455661 H7C0C1 242 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 APOEP02649 317 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 MYL4P12829 197 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 EIF2AK2P19525 551 aaKnown RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 ATP5OP48047 213 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 CLCN2P51788 898 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 NRLP54845 237 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 FKBP1AP62942 108 aaKnown RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 CBLBQ13191 982 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 TUBB3Q13509 450 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 ZNF394Q53GI3 561 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 FASTKD1Q53R41 847 aaKnown RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 ACBD5Q5T8D3 534 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 OGFRL1Q5TC84 451 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 MROH9Q5TGP6 573 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 KLHDC10Q6PID8 442 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 TMC7Q7Z402 723 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 FNIP1Q8TF40 1166 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 IRGQQ8WZA9 623 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 HSPH1Q92598 858 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 KCNK16Q96T55 309 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 POLR3FQ9H1D9 316 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 TIMMDC1Q9NPL8 285 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 CYP26B1Q9NR63 512 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 PLK2Q9NYY3 685 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 C6orf203Q9P0P8 240 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 GABBR1Q9UBS5 961 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 PCSK1NQ9UHG2 260 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 LZTS1Q9Y250 596 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 STYXL1Q9Y6J8 313 aa14.2□□□□□ -0.14
PTPRE-204ENST00000455661 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 ZSCAN9O15535 394 aaPredicted RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 STK10O94804 968 aaKnown RBP14.2□□□□□ -0.14
PTPRE-204ENST00000455661 PMLP29590 882 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms