RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ZNF564Q8TBZ8 553 aaPredicted RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 HES6Q96HZ4 224 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 CPXM1Q96SM3 734 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 HERC2P3Q9BVR0 1158 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 NSRP1Q9H0G5 558 aaKnown RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 CYTH4Q9UIA0 394 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 NOVA2Q9UNW9 492 aaKnown RBP16.58■□□□□ 0.24
SNX17-204ENST00000453453 RWDD3Q9Y3V2 267 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 NLRC5Q86WI3 1866 aa16.58■□□□□ 0.24
SNX17-204ENST00000453453 CLDN5O00501 218 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 MTA2O94776 668 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 CPB1P15086 417 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 HADHBP55084 474 aaKnown RBP16.57■□□□□ 0.24
SNX17-204ENST00000453453 TAP1Q03518 808 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 PTP4A2Q12974 167 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 DHX34Q14147 1143 aaKnown RBP16.57■□□□□ 0.24
SNX17-204ENST00000453453 QPCTQ16769 361 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 SLC39A12Q504Y0 691 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 RTP2Q5QGT7 225 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 PEX26Q7Z412 305 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 DDX53Q86TM3 631 aaKnown RBP16.57■□□□□ 0.24
SNX17-204ENST00000453453 SLC35F5Q8WV83 523 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 N4BP2L2Q92802 583 aaPredicted RBP16.57■□□□□ 0.24
SNX17-204ENST00000453453 MIEF2Q96C03 454 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 B3GALT6Q96L58 329 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 HSFY1Q96LI6 401 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 PKMYT1Q99640 499 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 PTPRDP23468 1912 aa16.57■□□□□ 0.24
SNX17-204ENST00000453453 URODP06132 367 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 GABRB2P47870 512 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 GLUD2P49448 558 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 RGS7P49802 495 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 MAGOHP61326 146 aaKnown RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 SMARCB1Q12824 385 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 ZNF268Q14587 947 aaPredicted RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 PSMD5Q16401 504 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 CCDC142Q17RM4 750 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 C2CD6Q53TS8 623 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 CYP4A22Q5TCH4 519 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PIGWQ7Z7B1 504 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 MAB21L3Q8N8X9 362 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 CLP1Q92989 425 aaKnown RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 MAGOHBQ96A72 148 aaKnown RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 TMEM209Q96SK2 561 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 FMO2Q99518 471 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 NEUROG2Q9H2A3 272 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 CENPHQ9H3R5 247 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 OSGEPQ9NPF4 335 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 HAUS2Q9NVX0 235 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 SLC12A4Q9UP95 1085 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 GOLGA6L10A0A0M3HER8 536 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 EFEMP2O95967 443 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 ERBB2P04626 1255 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 MMP13P45452 471 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 TRADDQ15628 312 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PLEKHA7Q6IQ23 1121 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PMF1Q6P1K2 205 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 DCUN1D2Q6PH85 259 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 CLEC20AQ6ZU45 233 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PAQR9Q6ZVX9 377 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 TAS1R1Q7RTX1 841 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PHLDB2Q86SQ0 1253 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 ZDHHC17Q8IUH5 632 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 RNF168Q8IYW5 571 aaPredicted RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 FUBP3Q96I24 572 aaKnown RBP eCLIP16.56■□□□□ 0.24
SNX17-204ENST00000453453 ZNF317Q96PQ6 595 aaPredicted RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 LRRC4Q9HBW1 653 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 DMAP1Q9NPF5 467 aaPredicted RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 CHST7Q9NS84 486 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 MTRRQ9UBK8 725 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PACSIN2Q9UNF0 486 aaPredicted RBP16.56■□□□□ 0.24
SNX17-204ENST00000453453 SSX2IPQ9Y2D8 614 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 PCDHB5Q9Y5E4 795 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 BACE2Q9Y5Z0 518 aa16.56■□□□□ 0.24
SNX17-204ENST00000453453 E5RJQ4 531 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 GOLGA8SH3BPF8 625 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 DAPK3O43293 454 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 FGF18O76093 207 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 AGTP01019 485 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 OR4Q2P0C623 313 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 BDNFP23560 247 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 ARPP19P56211 112 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 MAP3K7CLP57077 242 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 ELF3P78545 371 aaPredicted RBP16.55■□□□□ 0.24
SNX17-204ENST00000453453 DSG1Q02413 1049 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 CREMQ03060 361 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 DHX9Q08211 1270 aaKnown RBP16.55■□□□□ 0.24
SNX17-204ENST00000453453 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 OR6B2Q6IFH4 312 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 PRSS55Q6UWB4 352 aaPredicted RBP16.55■□□□□ 0.24
SNX17-204ENST00000453453 DAAM2Q86T65 1068 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 TMEM110Q86TL2 294 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 NT5DC3Q86UY8 548 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 PIGZQ86VD9 579 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 XYLT1Q86Y38 959 aa16.55■□□□□ 0.24
SNX17-204ENST00000453453 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
SNX17-204ENST00000453453 PLCD4Q9BRC7 762 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms