RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 A0A1W2PRU2 124 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 H3BQ06 376 aaPredicted RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 HSF2BPO75031 334 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 IPO7O95373 1038 aaKnown RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 LTFP02788 710 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 YWHAGP61981 247 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 YWHAZP63104 245 aaKnown RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 NTHL1P78549 312 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 CCZ1BP86790 482 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 CCZ1P86791 482 aaPredicted RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 C2CD6Q53TS8 623 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 BSPRYQ5W0U4 402 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 PLEKHA7Q6IQ23 1121 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 SHKBP1Q8TBC3 707 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 MRPS31Q92665 395 aaKnown RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 GOLGA1Q92805 767 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 KHSRPQ92945 711 aaKnown RBP eCLIP12.14□□□□□ -0.478e-8■■■■■ 29.1
SCN9A-204ENST00000452182 CDK5RAP1Q96SZ6 601 aaKnown RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 ATXN3LQ9H3M9 355 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 NMUR1Q9HB89 426 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 POPDC2Q9HBU9 364 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 ABCC13Q9NSE7 274 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 BRWD1Q9NSI6 2320 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 TMEM59LQ9UK28 342 aa12.14□□□□□ -0.47
SCN9A-204ENST00000452182 MRPS23Q9Y3D9 190 aaKnown RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 USP15Q9Y4E8 981 aaPredicted RBP12.14□□□□□ -0.47
SCN9A-204ENST00000452182 A0A1W2PQH9 124 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 SIGLEC16A6NMB1 481 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 MBTPS2O43462 519 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 OLFM2O95897 454 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 OAS1P00973 400 aaKnown RBP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 H2AFZP0C0S5 128 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 TMEM253P0C7T8 217 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 RALAP11233 206 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 RRM1P23921 792 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 FSHRP23945 695 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 MAGEA1P43355 309 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 PGFP49763 221 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 GALCP54803 685 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 GPC5P78333 572 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 KRT83P78385 493 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 CBX2Q14781 532 aaPredicted RBP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 MTF1Q14872 753 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 PUS10Q3MIT2 529 aaKnown RBP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 ARHGAP15Q53QZ3 475 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 FAM102AQ5T9C2 384 aaPredicted RBP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 KLHDC10Q6PID8 442 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 H2AFVQ71UI9 128 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 TADA2BQ86TJ2 420 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 NDRG1Q92597 394 aaKnown RBP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 TCEAL4Q96EI5 215 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 PIWIL1Q96J94 861 aaKnown RBP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 SLC2A13Q96QE2 648 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 PARVAQ9NVD7 372 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 OSER1Q9NX31 292 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.13□□□□□ -0.47
SCN9A-204ENST00000452182 PCDHA13Q9Y5I0 950 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 SCINQ9Y6U3 715 aa12.13□□□□□ -0.47
SCN9A-204ENST00000452182 COL6A3P12111 3177 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 GRXCR2A6NFK2 248 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 CYP1A2P05177 515 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 FYNP06241 537 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 KRT3P12035 628 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 WEE1P30291 646 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 MAMLD1Q13495 774 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 CLUL1Q15846 466 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 HECTD3Q5T447 861 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 DNAJC24Q6P3W2 148 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 ITFG1Q8TB96 612 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 CTNNBL1Q8WYA6 563 aaPredicted RBP12.12□□□□□ -0.47
SCN9A-204ENST00000452182 FAM149B1Q96BN6 582 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 ZNF653Q96CK0 615 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 SELENOOQ9BVL4 669 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 THAP2Q9H0W7 228 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 POMKQ9H5K3 350 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 TASP1Q9H6P5 420 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 MRPL47Q9HD33 250 aaKnown RBP12.12□□□□□ -0.47
SCN9A-204ENST00000452182 OLA1Q9NTK5 396 aaKnown RBP12.12□□□□□ -0.47
SCN9A-204ENST00000452182 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 CNOT8Q9UFF9 292 aaKnown RBP12.12□□□□□ -0.47
SCN9A-204ENST00000452182 CDH22Q9UJ99 828 aa12.12□□□□□ -0.47
SCN9A-204ENST00000452182 ZFP37Q9Y6Q3 630 aaPredicted RBP12.12□□□□□ -0.47
SCN9A-204ENST00000452182 C5orf42Q9H799 3197 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 NRG2O14511 850 aaPredicted RBP12.11□□□□□ -0.47
SCN9A-204ENST00000452182 TLR5O60602 858 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 DAB1O75553 588 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 RARGP13631 454 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 ABCB4P21439 1286 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 NOS2P35228 1153 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 CYP4F8P98187 520 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 TCEAL1Q15170 157 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 TAF5Q15542 800 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 TEAD2Q15562 447 aa12.11□□□□□ -0.47
SCN9A-204ENST00000452182 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms