RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 LYSMD4Q5XG99 296 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 SLC23A3Q6PIS1 610 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 RABEPKQ7Z6M1 372 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 BBS7Q8IWZ6 715 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CEP57L1Q8IYX8 460 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 HMGB4Q8WW32 186 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 PIGKQ92643 395 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CYLDQ9NQC7 956 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 TLR8Q9NR97 1041 aaKnown RBP11.52□□□□□ -0.57
USP1-204ENST00000452143 GMIPQ9P107 970 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 CHORDC1Q9UHD1 332 aaPredicted RBP11.52□□□□□ -0.57
USP1-204ENST00000452143 CIZ1Q9ULV3 898 aaPredicted RBP11.52□□□□□ -0.57
USP1-204ENST00000452143 STARD13Q9Y3M8 1113 aa11.52□□□□□ -0.57
USP1-204ENST00000452143 DSPP15924 2871 aaKnown RBP11.51□□□□□ -0.57
USP1-204ENST00000452143 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 PDXKO00764 312 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 IKBKBO14920 756 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 CACNG3O60359 315 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 VNN1O95497 513 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 ASS1P00966 412 aaKnown RBP11.51□□□□□ -0.57
USP1-204ENST00000452143 MYL1P05976 194 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 FAM200BP0CF97 657 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 ZSCAN22P10073 491 aaPredicted RBP11.51□□□□□ -0.57
USP1-204ENST00000452143 HOXB2P14652 356 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 NTSR1P30989 418 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 AFMP43652 599 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 ANO4Q32M45 955 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 UNQ6494/PRO21346Q6UXR6 183 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 SLC36A4Q6YBV0 504 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 HTR3DQ70Z44 454 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 ACOT1Q86TX2 421 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 TMEFF1Q8IYR6 380 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 CRYBG2Q8N1P7 616 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 PGBD3Q8N328 593 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 KIAA0895Q8NCT3 520 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 ZMIZ2Q8NF64 920 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 CEP76Q8TAP6 659 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 SLC2A14Q8TDB8 520 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 RLN3Q8WXF3 142 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 SMOQ99835 787 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 BACH2Q9BYV9 841 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 SDCBP2Q9H190 292 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 PNPLA8Q9NP80 782 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 EXOC1Q9NV70 894 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 DMAC2Q9NW81 257 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 MARK1Q9P0L2 795 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 MBD1Q9UIS9 605 aaPredicted RBP11.51□□□□□ -0.57
USP1-204ENST00000452143 CFAP45Q9UL16 551 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 PCDHA7Q9UN72 937 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 WASF3Q9UPY6 502 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 PCNX2A6NKB5 2137 aa11.51□□□□□ -0.57
USP1-204ENST00000452143 ADAMTS9Q9P2N4 1935 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 TMEM8BA6NDV4 472 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 UPK3BL1B0FP48 263 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 UPK3BL2E5RIL1 263 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 GIPC1O14908 333 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 KLRC4O43908 158 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 GREM1O60565 184 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ZNF217O75362 1048 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 F13A1P00488 732 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 NR3C1P04150 777 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 SLFN14P0C7P3 912 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 CCDC130P13994 396 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ENGP17813 658 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 GABRG2P18507 467 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ATP5C1P36542 298 aaKnown RBP11.5□□□□□ -0.57
USP1-204ENST00000452143 ASPAP45381 313 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 NDST1P52848 882 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 INCA1Q0VD86 236 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 FOXC1Q12948 553 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 EMC10Q5UCC4 262 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 GRAMD4Q6IC98 578 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 KLHDC10Q6PID8 442 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ARMCX6Q7L4S7 300 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 TMEM25Q86YD3 366 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 NAT16Q8N8M0 369 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 TMC2Q8TDI7 906 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 SNX21Q969T3 373 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 XPO6Q96QU8 1125 aaKnown RBP11.5□□□□□ -0.57
USP1-204ENST00000452143 GABRG3Q99928 467 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 IMPG2Q9BZV3 1241 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 KCTD10Q9H3F6 313 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 SLC32A1Q9H598 525 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ZDHHC4Q9NPG8 344 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■■■■■ 37.3
USP1-204ENST00000452143 TMEM74BQ9NUR3 256 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 DNAJC17Q9NVM6 304 aaKnown RBP11.5□□□□□ -0.57
USP1-204ENST00000452143 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 HMGXB4Q9UGU5 601 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 LSM7Q9UK45 103 aaKnown RBP11.5□□□□□ -0.57
USP1-204ENST00000452143 PILRBQ9UKJ0 227 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 SCML2Q9UQR0 700 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ATRXP46100 2492 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 ITPR1Q14643 2758 aa11.5□□□□□ -0.57
USP1-204ENST00000452143 NEDD8-MDP1E9PL57 170 aa11.49□□□□□ -0.57
USP1-204ENST00000452143 MAPK13O15264 365 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms