RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 SYPL2Q5VXT5 272 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 KIAA1841Q6NSI8 718 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 HERC6Q8IVU3 1022 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 KLHL7Q8IXQ5 586 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 NUP93Q8N1F7 819 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 TTC9BQ8N6N2 239 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 CLP1Q92989 425 aaKnown RBP11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 PGAP3Q96FM1 320 aaPredicted RBP11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 SPATA17Q96L03 361 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 CLSTN3Q9BQT9 956 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 TRIM62Q9BVG3 475 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 PARD6BQ9BYG5 372 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 DDX47Q9H0S4 455 aaKnown RBP11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 CRISPLD1Q9H336 500 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 COMMD8Q9NX08 183 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 CALCOCO1Q9P1Z2 691 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 NAALADL1Q9UQQ1 740 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 SCML2Q9UQR0 700 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 EFR3BQ9Y2G0 817 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 INSL6Q9Y581 213 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 PCDHB12Q9Y5F1 795 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC4A7Q9Y6M7 1214 aa11.73□□□□□ -0.53
NDUFA3-209ENST00000451517 FAM92AA1XBS5 289 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 CAPN9O14815 690 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RAD51CO43502 376 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 URODP06132 367 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RPL17P18621 184 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 CHRNA3P32297 505 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 OR1D2P34982 312 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RDXP35241 583 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 ATXN1P54253 815 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 DDR2Q16832 855 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 TFDP3Q5H9I0 405 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RASIP1Q5U651 963 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 SDHAF4Q5VUM1 108 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 BSPRYQ5W0U4 402 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 WDR93Q6P2C0 686 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 SCYL2Q6P3W7 929 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 VSIG1Q86XK7 387 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 PSTKQ8IV42 348 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 KCTD6Q8NC69 237 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 FAM71BQ8TC56 605 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 HSPH1Q92598 858 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 CEP295NLQ96MC4 621 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RUNDC3BQ96NL0 473 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 RAD9AQ99638 391 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 ZBED2Q9BTP6 218 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 SNRNP25Q9BV90 132 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 HEMGNQ9BXL5 484 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 FBXO44Q9H4M3 255 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 LRRC19Q9H756 370 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 HSFX1Q9UBD0 423 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 DMGDHQ9UI17 866 aaKnown RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 ZMYND8Q9ULU4 1186 aaPredicted RBP11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 SLC27A5Q9Y2P5 690 aa11.72□□□□□ -0.53
NDUFA3-209ENST00000451517 ZNF487B1APH4 448 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 M0QYT0 321 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 C2CD2LO14523 706 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 LILRB3O75022 631 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 FGF18O76093 207 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 ABLIM3O94929 683 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 TJP3O95049 919 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 RTN3O95197 1032 aaPredicted RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 CD48P09326 243 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 NCAM1P13591 858 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 KRT10P13645 584 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 ATP2A2P16615 1042 aaKnown RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 COILP38432 576 aaPredicted RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 FNTAP49354 379 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 YWHAGP61981 247 aaKnown RBP eCLIP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 VSNL1P62760 191 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 MRPS25P82663 173 aaKnown RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 DUSP4Q13115 394 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 RAB33AQ14088 237 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 DHX34Q14147 1143 aaKnown RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 DPYSL3Q14195 570 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 PDK2Q15119 407 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 MGAT5BQ3V5L5 792 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 ERMARDQ5T6L9 678 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 TPGS2Q68CL5 300 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 TTC27Q6P3X3 843 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 MAATS1Q7Z4T9 603 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 MON1AQ86VX9 555 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 VPS52Q8N1B4 723 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 CCDC26Q8TAB7 109 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 HDAC7Q8WUI4 952 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 MAGOHBQ96A72 148 aaKnown RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 SEPT5Q99719 369 aaPredicted RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 LBHD1Q9BQE6 289 aaPredicted RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 DCLK3Q9C098 648 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 ZBP1Q9H171 429 aa11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 MTIF3Q9H2K0 278 aaKnown RBP11.71□□□□□ -0.53
NDUFA3-209ENST00000451517 RXFP1Q9HBX9 757 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms