RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 SCML2Q9UQR0 700 aa28.65■■■□□ 2.18
USP42-204ENST00000451154 A0A1W2PQ27 194 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 A0A1W2PQ64 194 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 A0A1W2PQD8 194 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 TULP3O75386 442 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 ZNF202O95125 648 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 RPL13P26373 211 aaKnown RBP28.64■■■□□ 2.18
USP42-204ENST00000451154 PSMC2P35998 433 aaKnown RBP28.64■■■□□ 2.18
USP42-204ENST00000451154 WHAMMQ8TF30 809 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 RLN3Q8WXF3 142 aa28.64■■■□□ 2.18
USP42-204ENST00000451154 DDX1Q92499 740 aaKnown RBP28.64■■■□□ 2.18
USP42-204ENST00000451154 SCAND2PQ9GZW5 306 aaPredicted RBP28.64■■■□□ 2.18
USP42-204ENST00000451154 CHD8Q9HCK8 2581 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 TRIM24O15164 1050 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 CYP26A1O43174 497 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 HOXC11O43248 304 aaPredicted RBP28.63■■■□□ 2.17
USP42-204ENST00000451154 ADAM23O75077 832 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 ALDH1A2O94788 518 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 TRIM21P19474 475 aaKnown RBP28.63■■■□□ 2.17
USP42-204ENST00000451154 ACO1P21399 889 aaKnown RBP28.63■■■□□ 2.17
USP42-204ENST00000451154 PMS2CLQ68D20 193 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 EEF2KMTQ96G04 330 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 DUSP9Q99956 384 aaKnown RBP28.63■■■□□ 2.17
USP42-204ENST00000451154 NIF3L1Q9GZT8 377 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 GDPD2Q9HCC8 539 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 DEC1Q9P2X7 70 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 NUDT5Q9UKK9 219 aa28.63■■■□□ 2.17
USP42-204ENST00000451154 CIZ1Q9ULV3 898 aaPredicted RBP28.63■■■□□ 2.17
USP42-204ENST00000451154 GREM1O60565 184 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 ATP5C1P36542 298 aaKnown RBP28.62■■■□□ 2.17
USP42-204ENST00000451154 HSF5Q4G112 596 aaPredicted RBP28.62■■■□□ 2.17
USP42-204ENST00000451154 EOGTQ5NDL2 527 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 HTR3DQ70Z44 454 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 C11orf74Q86VG3 221 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 OLIG1Q8TAK6 271 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 NMUR1Q9HB89 426 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 POLMQ9NP87 494 aaPredicted RBP28.62■■■□□ 2.17
USP42-204ENST00000451154 ATP6V1DQ9Y5K8 247 aa28.62■■■□□ 2.17
USP42-204ENST00000451154 CILPO75339 1184 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 RNF43Q68DV7 783 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 SMYD4Q8IYR2 804 aaPredicted RBP28.61■■■□□ 2.17
USP42-204ENST00000451154 FRMD1Q8N878 549 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 HMGB4Q8WW32 186 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 SEMA4DQ92854 862 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 TMEM8AQ9HCN3 771 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 CYLDQ9NQC7 956 aa28.61■■■□□ 2.17
USP42-204ENST00000451154 CACNA1BQ00975 2339 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 A0A1W2PQH9 124 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 MDM4O15151 490 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 ENPEPQ07075 957 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 ZCWPW2Q504Y3 356 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 ZNF394Q53GI3 561 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 PPP1R26Q5T8A7 1209 aaPredicted RBP28.6■■■□□ 2.17
USP42-204ENST00000451154 CCDC150Q8NCX0 1101 aa28.6■■■□□ 2.17
USP42-204ENST00000451154 BCCIPQ9P287 314 aaKnown RBP eCLIP28.6■■■□□ 2.17
USP42-204ENST00000451154 RARGP13631 454 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 DHPSP49366 369 aaPredicted RBP28.59■■■□□ 2.17
USP42-204ENST00000451154 PREPLQ4J6C6 727 aaPredicted RBP28.59■■■□□ 2.17
USP42-204ENST00000451154 C10orf76Q5T2E6 689 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 KRT39Q6A163 491 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 TPGS1Q6ZTW0 290 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 PGBD3Q8N328 593 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 HEXIM2Q96MH2 286 aaKnown RBP28.59■■■□□ 2.17
USP42-204ENST00000451154 DUSP16Q9BY84 665 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 HCN2Q9UL51 889 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 PCDHA5Q9Y5H7 936 aa28.59■■■□□ 2.17
USP42-204ENST00000451154 TCRBV21S2A2A0A5A6 115 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 NEDD8-MDP1E9PL57 170 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 MAP3K13O43283 966 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 GTF2H1P32780 548 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 P2RY2P41231 377 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 KIF11P52732 1056 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 N4BP2L1Q5TBK1 243 aaPredicted RBP28.58■■■□□ 2.17
USP42-204ENST00000451154 SCD5Q86SK9 330 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 ZNF513Q8N8E2 541 aaPredicted RBP28.58■■■□□ 2.17
USP42-204ENST00000451154 TERB1Q8NA31 727 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 EDEM2Q9BV94 578 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 LSM14BQ9BX40 385 aaKnown RBP28.58■■■□□ 2.17
USP42-204ENST00000451154 PNPLA8Q9NP80 782 aa28.58■■■□□ 2.17
USP42-204ENST00000451154 DNAJC17Q9NVM6 304 aaKnown RBP28.58■■■□□ 2.17
USP42-204ENST00000451154 MTPAPQ9NVV4 582 aaKnown RBP eCLIP28.58■■■□□ 2.17
USP42-204ENST00000451154 WASP42768 502 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 MCCD1P59942 119 aaPredicted RBP28.57■■■□□ 2.16
USP42-204ENST00000451154 GOLGA8FQ08AF8 430 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 GOLGA8DPQ0D2H9 430 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 C10orf120Q5SQS8 335 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 NUDT18Q6ZVK8 323 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 CYP2U1Q7Z449 544 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 MIB1Q86YT6 1006 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 KCNV2Q8TDN2 545 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 PIGKQ92643 395 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 BBS2Q9BXC9 721 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 MBD1Q9UIS9 605 aaPredicted RBP28.57■■■□□ 2.16
USP42-204ENST00000451154 DNMT3LQ9UJW3 386 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 NAGPAQ9UK23 515 aa28.57■■■□□ 2.16
USP42-204ENST00000451154 LSM7Q9UK45 103 aaKnown RBP28.57■■■□□ 2.16
USP42-204ENST00000451154 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa28.56■■■□□ 2.16
USP42-204ENST00000451154 C4orf47A7E2U8 309 aa28.56■■■□□ 2.16
USP42-204ENST00000451154 PATE3B3GLJ2 98 aa28.56■■■□□ 2.16
USP42-204ENST00000451154 KHNYNO15037 678 aaKnown RBP28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms