RNA–Protein interactions for RNA: ENST00000449757.5

DDX39B-211, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-211ENST00000449757 USP28Q96RU2 1077 aa10.91□□□□□ -0.66
DDX39B-211ENST00000449757 BBS2Q9BXC9 721 aa10.91□□□□□ -0.66
DDX39B-211ENST00000449757 SLC6A17Q9H1V8 727 aa10.91□□□□□ -0.66
DDX39B-211ENST00000449757 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
DDX39B-211ENST00000449757 LSM7Q9UK45 103 aaKnown RBP10.91□□□□□ -0.66
DDX39B-211ENST00000449757 RAD54BQ9Y620 910 aa10.91□□□□□ -0.66
DDX39B-211ENST00000449757 ACACAQ13085 2346 aa10.91□□□□□ -0.66
DDX39B-211ENST00000449757 DSPP15924 2871 aaKnown RBP10.91□□□□□ -0.66
DDX39B-211ENST00000449757 TP53BP1Q12888 1972 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-211ENST00000449757 A0A0A0MRY4 1105 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 MEI4A8MW99 385 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 ARHGAP33O14559 1287 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 TLR5O60602 858 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 ZNF217O75362 1048 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CCDC130P13994 396 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 HOXD13P35453 343 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CASP4P49662 377 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 TUBP50607 506 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CDH8P55286 799 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 AMPD3Q01432 767 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 ZNF423Q2M1K9 1284 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 ZNF667Q5HYK9 610 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 SYCP2LQ5T4T6 812 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 SLC41A1Q8IVJ1 513 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 IPO4Q8TEX9 1081 aaKnown RBP10.9□□□□□ -0.66
DDX39B-211ENST00000449757 TNIP3Q96KP6 325 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CAMK1GQ96NX5 476 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 ACOX2Q99424 681 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 TRIM9Q9C026 710 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CAPN10Q9HC96 672 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CD93Q9NPY3 652 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 FAM49BQ9NUQ9 324 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 CACNA2D2Q9NY47 1150 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 SUSD2Q9UGT4 822 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 PTPRBP23467 1997 aa10.9□□□□□ -0.66
DDX39B-211ENST00000449757 A0A1W2PQF6 199 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 UPK3BL1B0FP48 263 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 UPK3BL2E5RIL1 263 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 SH3BP5O60239 455 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 EXOC3O60645 756 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 TYRP14679 529 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 GNSP15586 552 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 SYT1P21579 422 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 ADORA2BP29275 332 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 ATICP31939 592 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 MAP3K7CLP57077 242 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 SLC39A14Q15043 492 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 LRSAM1Q6UWE0 723 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 TOGARAM2Q6ZUX3 1019 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 ACOT1Q86TX2 421 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 CACUL1Q86Y37 369 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 NAXDQ8IW45 347 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 KCNV2Q8TDN2 545 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 MIR1-1HGQ9H1L0 117 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 TLR8Q9NR97 1041 aaKnown RBP10.89□□□□□ -0.67
DDX39B-211ENST00000449757 PLXNB3Q9ULL4 1909 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 GOLGA4Q13439 2230 aaKnown RBP10.89□□□□□ -0.67
DDX39B-211ENST00000449757 DMXL2Q8TDJ6 3036 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 TMEM131Q92545 1883 aa10.89□□□□□ -0.67
DDX39B-211ENST00000449757 A0A1W2PQD8 194 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 MDM4O15151 490 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 LAMA5O15230 3695 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 CYP26A1O43174 497 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 TGFB1I1O43294 461 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 CACNG3O60359 315 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 STAU1O95793 577 aaKnown RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 TBX18O95935 607 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 FTH1P19P0C7X4 201 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 P4HA1P13674 534 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 CD59P13987 128 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 TRIM21P19474 475 aaKnown RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 MAOBP27338 520 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 DGKGP49619 791 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 GRIK2Q13002 908 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 NCOA4Q13772 614 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 CKAP5Q14008 2032 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 HNRNPDQ14103 355 aaKnown RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 STARD3Q14849 445 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 TRIP6Q15654 476 aaKnown RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 WDR45BQ5MNZ6 344 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 C19orf48Q6RUI8 117 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 EPM2AIP1Q7L775 607 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 ZCCHC9Q8N567 271 aaKnown RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 PNPLA1Q8N8W4 532 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 ZNF507Q8TCN5 953 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 SLC2A14Q8TDB8 520 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 ZNF516Q92618 1163 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 BLZF1Q9H2G9 400 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 CUEDC2Q9H467 287 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 FBXO44Q9H4M3 255 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 SLC39A2Q9NP94 309 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.88□□□□□ -0.671e-10■■■■■ 112
DDX39B-211ENST00000449757 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
DDX39B-211ENST00000449757 COMMD8Q9NX08 183 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 PLK2Q9NYY3 685 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 WDR35Q9P2L0 1181 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 HMGXB4Q9UGU5 601 aa10.88□□□□□ -0.67
DDX39B-211ENST00000449757 HCN2Q9UL51 889 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms