RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 USP3Q9Y6I4 520 aa13.31□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ZFHX2Q9C0A1 2572 aaPredicted RBP13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 E7ENQ6 273 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 KCNK3O14649 394 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TEX28O15482 410 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 LRCH4O75427 683 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 LTFP02788 710 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 RB1P06400 928 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 USP17L7P0C7H9 530 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 IL9P15248 144 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ATF2P15336 505 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 PDGFRAP16234 1089 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 KCNA5P22460 613 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DUSP4Q13115 394 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SMC1AQ14683 1233 aaKnown RBP13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DDR2Q16832 855 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SDHAF4Q5VUM1 108 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 PLPP4Q5VZY2 271 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 PM20D1Q6GTS8 502 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 PTCRAQ6ISU1 281 aaPredicted RBP13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 HFE2Q6ZVN8 426 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TMC7Q7Z402 723 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 NUP93Q8N1F7 819 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ZNF461Q8TAF7 563 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 GDPD5Q8WTR4 605 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 POF1BQ8WVV4 589 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 NDRG1Q92597 394 aaKnown RBP13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 KRT35Q92764 455 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 GOLGA1Q92805 767 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CEP295NLQ96MC4 621 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CFAP57Q96MR6 1250 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SLC2A13Q96QE2 648 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TRIM62Q9BVG3 475 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 L2HGDHQ9H9P8 463 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 POPDC2Q9HBU9 364 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CDC23Q9UJX2 597 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SLC27A5Q9Y2P5 690 aa13.3□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SPTBN4Q9H254 2564 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DENND4CQ5VZ89 1909 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 GRXCR2A6NFK2 248 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CES2O00748 559 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CSPG5O95196 566 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 RTN3O95197 1032 aaPredicted RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ADH1AP07327 375 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CNPP09543 421 aaKnown RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 PRLRP16471 622 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 GJC1P36383 396 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 MATKP42679 507 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SULT1E1P49888 294 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TAS2R40P59535 323 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ERVK-21P61565 698 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 YWHAZP63104 245 aaKnown RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FOXK2Q01167 660 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SLC25A11Q02978 314 aaKnown RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TUBB2AQ13885 445 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ACAP1Q15027 740 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CDO1Q16878 200 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 WHAMMP3Q1A5X7 153 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 C15orf59Q2T9L4 293 aaPredicted RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DCAF12L1Q5VU92 463 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 OTUD1Q5VV17 481 aaPredicted RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DENND5BQ6ZUT9 1274 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 RHOT1Q8IXI2 618 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DEFB106AQ8N104 65 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SPPL3Q8TCT6 385 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ALG3Q92685 438 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DDX23Q9BUQ8 820 aaKnown RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TUBB2BQ9BVA1 445 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CARD9Q9H257 536 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FBXO44Q9H4M3 255 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 MAFFQ9ULX9 164 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 STAP1Q9ULZ2 295 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 IRAK3Q9Y616 596 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 HELZP42694 1942 aaKnown RBP13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ANAPC1Q9H1A4 1944 aa13.29□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CACNA1HO95180 2353 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FAM92AA1XBS5 289 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FSCN2O14926 492 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 RNF8O76064 485 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SEC24AO95486 1093 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TCF4P15884 667 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 DNAJB1P25685 340 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CXCR5P32302 372 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 NOS2P35228 1153 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 SSR1P43307 286 aaKnown RBP13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TUFMP49411 452 aaKnown RBP13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 ERVFC1P60507 584 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 USP46P62068 366 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 CC2D1AQ6P1N0 951 aaPredicted RBP13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 POLNQ7Z5Q5 900 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 TCEAL8Q8IYN2 117 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 COG1Q8WTW3 980 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FAM172AQ8WUF8 416 aa13.28□□□□□ -0.28
HLA-DRB9-201ENST00000449413 FBXO32Q969P5 355 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms