RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TWF1Q12792 350 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 VEPH1Q14D04 833 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 RPS6KA1Q15418 735 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 STRADAQ7RTN6 431 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 POLNQ7Z5Q5 900 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 ZNF276Q8N554 614 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 SLC7A14Q8TBB6 771 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 GPR152Q8TDT2 470 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 SLC22A17Q8WUG5 538 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 CFAP57Q96MR6 1250 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 CERS4Q9HA82 394 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 TMEM51Q9NW97 253 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 PCDHA3Q9Y5H8 950 aa20.15■□□□□ 0.82
RPS28-202ENST00000449223 TMEM110-MUSTN1A8MSY1 372 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 CES2O00748 559 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 DDX3YO15523 660 aaKnown RBP20.14■□□□□ 0.81
RPS28-202ENST00000449223 CLASP2O75122 1294 aaKnown RBP20.14■□□□□ 0.81
RPS28-202ENST00000449223 RNF8O76064 485 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 PAPLNO95428 1278 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 EPHB3P54753 998 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 MTMR3Q13615 1198 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 DCAF6Q58WW2 860 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 OTUD1Q5VV17 481 aaPredicted RBP20.14■□□□□ 0.81
RPS28-202ENST00000449223 SYPL2Q5VXT5 272 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 ITIH5Q86UX2 942 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 CPNE8Q86YQ8 564 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 STKLD1Q8NE28 680 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 PDZD8Q8NEN9 1154 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 GIPC2Q8TF65 315 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 FBXO32Q969P5 355 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 SLITRK1Q96PX8 696 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 DPP7Q9UHL4 492 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 PACSIN2Q9UNF0 486 aaPredicted RBP20.14■□□□□ 0.81
RPS28-202ENST00000449223 HYOU1Q9Y4L1 999 aa20.14■□□□□ 0.81
RPS28-202ENST00000449223 C8AP07357 584 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 POU2F2P09086 479 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 NCAM1P13591 858 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 TCP1P17987 556 aaKnown RBP20.13■□□□□ 0.81
RPS28-202ENST00000449223 PPP3CCP48454 512 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 PEX5P50542 639 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 SLC25A11Q02978 314 aaKnown RBP20.13■□□□□ 0.81
RPS28-202ENST00000449223 TAF10Q12962 218 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 TUBB2AQ13885 445 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 CC2D1AQ6P1N0 951 aaPredicted RBP20.13■□□□□ 0.81
RPS28-202ENST00000449223 RHOT1Q8IXI2 618 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 GDPD5Q8WTR4 605 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 ZNF592Q92610 1267 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 MRPL38Q96DV4 380 aaKnown RBP20.13■□□□□ 0.81
RPS28-202ENST00000449223 TUBB2BQ9BVA1 445 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 ADAM33Q9BZ11 813 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 NMUR1Q9HB89 426 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 TLR8Q9NR97 1041 aaKnown RBP20.13■□□□□ 0.81
RPS28-202ENST00000449223 NAALADL1Q9UQQ1 740 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 SAR1BQ9Y6B6 198 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 OBSL1O75147 1896 aa20.13■□□□□ 0.81
RPS28-202ENST00000449223 TMEM265A0A087WTH1 108 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 A0A1W2PQH9 124 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 CAPN9O14815 690 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 NCK2O43639 380 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 IGLV3-25P01717 112 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 HDAC4P56524 1084 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 IFRD2Q12894 506 aaPredicted RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 EIF4EBP2Q13542 120 aaPredicted RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 C15orf59Q2T9L4 293 aaPredicted RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 DNTTIP2Q5QJE6 756 aaKnown RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 MSANTD2Q6P1R3 559 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 FAM172AQ8WUF8 416 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 CDCA3Q99618 268 aaPredicted RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 CARD9Q9H257 536 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 OSER1Q9NX31 292 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 GMIPQ9P107 970 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 UXTQ9UBK9 157 aaPredicted RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 ANAPC1Q9H1A4 1944 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 ZMYND10O75800 440 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 SPATA31D3P0C874 917 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 PGFP49763 221 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 TAS2R40P59535 323 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 PTPROQ16827 1216 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 DUSP6Q16828 381 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 SH3PXD2AQ5TCZ1 1133 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 BTBD8Q5XKL5 378 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 SPATA31D4Q6ZUB0 917 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 DNAJB7Q7Z6W7 309 aaPredicted RBP20.12■□□□□ 0.81
RPS28-202ENST00000449223 KRT35Q92764 455 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 OSBPL9Q96SU4 736 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 TBCBQ99426 244 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 SMOC2Q9H3U7 446 aa20.12■□□□□ 0.81
RPS28-202ENST00000449223 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.12■□□□□ 0.81
RPS28-202ENST00000449223 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.12■□□□□ 0.81
RPS28-202ENST00000449223 DENND4CQ5VZ89 1909 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 F9P00740 461 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 LRG1P02750 347 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 HNRNPA1P09651 372 aaKnown RBP eCLIP20.11■□□□□ 0.81
RPS28-202ENST00000449223 TFE3P19532 575 aaPredicted RBP20.11■□□□□ 0.81
RPS28-202ENST00000449223 MIPP30301 263 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 ATP11AP98196 1134 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 KCNC3Q14003 757 aa20.11■□□□□ 0.81
RPS28-202ENST00000449223 HADHQ16836 314 aaKnown RBP20.11■□□□□ 0.81
RPS28-202ENST00000449223 DAB2IPQ5VWQ8 1189 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms