RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 C9orf50Q5SZB4 431 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 Q8N9G6 341 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TRIM54Q9BYV2 358 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNHIT2Q9UHR6 403 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 LNPEPQ9UIQ6 1025 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TCRBV21S2A2A0A5A6 115 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TADA3O75528 432 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAPTP10636 758 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 DEFB103AP81534 67 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 UAP1Q16222 522 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 EEF1DP3Q658K8 133 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 C19orf48Q6RUI8 117 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 IL27RAQ6UWB1 636 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.85□□□□□ -1.472e-6■■□□□ 12.5
CDC42BPA-209ENST00000448940 CEP128Q6ZU80 1094 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMCO2Q7Z6W1 182 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 C11orf96Q7Z7L8 435 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 LCA5Q86VQ0 697 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 NUP93Q8N1F7 819 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF384Q8TF68 577 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 DTNBP1Q96EV8 351 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 UBXN6Q9BZV1 441 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 NDST4Q9H3R1 872 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CCDC86Q9H6F5 360 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CNOT8Q9UFF9 292 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 AMFRQ9UKV5 643 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 MAFBQ9Y5Q3 323 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 PIAS3Q9Y6X2 628 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 COL2A1P02458 1487 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 F5H423 210 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 SLC16A3O15427 465 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 GMNNO75496 209 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 KRT1P04264 644 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPP3CCP48454 512 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 OC90Q02509 493 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 WHAMMQ8TF30 809 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 WDCPQ9H6R7 721 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZFP37Q9Y6Q3 630 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF638Q14966 1978 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 F8VP50 259 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZNF862O60290 1169 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TYMPP19971 482 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CD72P21854 359 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 DDX6P26196 483 aaKnown RBP eCLIP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 BST2Q10589 180 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CARTPTQ16568 116 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CBWD2Q8IUF1 395 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TMEM145Q8NBT3 493 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPP4R1Q8TF05 950 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 STAMBPL1Q96FJ0 436 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 EDEM2Q9BV94 578 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 PPIEQ9UNP9 301 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 A8MU76 341 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 B4GALT5O43286 388 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TLR5O60602 858 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 LYPLA2O95372 231 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 MYZAPP0CAP1 466 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 PTPN1P18031 435 aaKnown RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 MESDQ14696 234 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 KAZNQ674X7 775 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAAH2Q6GMR7 532 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ANO5Q75V66 913 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 LRRC52Q8N7C0 313 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARMC2Q8NEN0 867 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 UBA3Q8TBC4 463 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 TOP1MTQ969P6 601 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 NXPE3Q969Y0 559 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CINPQ9BW66 212 aaPredicted RBP5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 PBX4Q9BYU1 374 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 BTBD1Q9H0C5 482 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 RNF39Q9H2S5 420 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 AGPAT3Q9NRZ7 376 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ANGPTL2Q9UKU9 493 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CDH7Q9ULB5 785 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 GUCA1BQ9UMX6 200 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 ARHGAP42A6NI28 874 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 FAM227AF5H4B4 570 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CNTN5O94779 1100 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 GSTA1P08263 222 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 GSTA2P09210 222 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 KRT3P12035 628 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 AGXTP21549 392 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 SKP1P63208 163 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 VITQ6UXI7 678 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 DNAJC5GQ8N7S2 189 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 HHIPQ96QV1 700 aa5.85□□□□□ -1.47
CDC42BPA-209ENST00000448940 CBX4O00257 560 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 MGEA5O60502 916 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 CNMDO75829 334 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 ZBED1O96006 694 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 CCR1P32246 355 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 PBX2P40425 430 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 GRB10Q13322 594 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 VWA2Q5GFL6 755 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 ITPRIPL1Q6GPH6 555 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 FRMD5Q7Z6J6 570 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 HID1Q8IV36 788 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 CLYBLQ8N0X4 340 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 OXR1Q8N573 874 aa5.84□□□□□ -1.47
CDC42BPA-209ENST00000448940 ATPAF2Q8N5M1 289 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms