RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 CETN1Q12798 172 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 CUL2Q13617 745 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 RSPO4Q2I0M5 234 aaPredicted RBP20.74■□□□□ 0.91
VCP-203ENST00000448530 ANO4Q32M45 955 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 NUDT18Q6ZVK8 323 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 CCDC186Q7Z3E2 898 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 TSTD1Q8NFU3 115 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 CDK5RAP1Q96SZ6 601 aaKnown RBP20.74■□□□□ 0.91
VCP-203ENST00000448530 KLF16Q9BXK1 252 aaPredicted RBP20.74■□□□□ 0.91
VCP-203ENST00000448530 NMUR1Q9HB89 426 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 SPHK2Q9NRA0 654 aa20.74■□□□□ 0.91
VCP-203ENST00000448530 TBXAS1P24557 533 aaPredicted RBP20.73■□□□□ 0.91
VCP-203ENST00000448530 GRIA2P42262 883 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 PLA2G4AP47712 749 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 LRMPQ12912 555 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 ARHGAP17Q68EM7 881 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 KLHDC10Q6PID8 442 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 HTR3DQ70Z44 454 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 DGLUCYQ7Z3D6 616 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 C12orf40Q86WS4 652 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 ARHGAP18Q8N392 663 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 CCDC33Q8N5R6 958 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 NELFBQ8WX92 580 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 UBXN6Q9BZV1 441 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 PARD6AQ9NPB6 346 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.73■□□□□ 0.91
VCP-203ENST00000448530 OSER1Q9NX31 292 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 DEC1Q9P2X7 70 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 HESX1Q9UBX0 185 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 CDV3Q9UKY7 258 aaKnown RBP20.73■□□□□ 0.91
VCP-203ENST00000448530 MMP17Q9ULZ9 603 aa20.73■□□□□ 0.91
VCP-203ENST00000448530 BIN1O00499 593 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 HOXC11O43248 304 aaPredicted RBP20.72■□□□□ 0.91
VCP-203ENST00000448530 GADD45BO75293 160 aaPredicted RBP20.72■□□□□ 0.91
VCP-203ENST00000448530 CD19P15391 556 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 CD44P16070 742 aaKnown RBP20.72■□□□□ 0.91
VCP-203ENST00000448530 TNFRSF4P43489 277 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 FMO5P49326 533 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 DGKEP52429 567 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 SGO2Q562F6 1265 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 TMEM25Q86YD3 366 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 NAT16Q8N8M0 369 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 ANKRD52Q8NB46 1076 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 WBP2Q969T9 261 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 CLIC5Q9NZA1 410 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 EBF1Q9UH73 591 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 NUDT5Q9UKK9 219 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 CTNND2Q9UQB3 1225 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 USP3Q9Y6I4 520 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 EML5Q05BV3 1969 aa20.72■□□□□ 0.91
VCP-203ENST00000448530 TBC1D3BA6NDS4 549 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 FOXD2O60548 495 aaPredicted RBP20.71■□□□□ 0.91
VCP-203ENST00000448530 ALDH1A2O94788 518 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 TGM1P22735 817 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 TIE1P35590 1138 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 CSRP2Q16527 193 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 GOLGA7BQ2TAP0 167 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 HSF5Q4G112 596 aaPredicted RBP20.71■□□□□ 0.91
VCP-203ENST00000448530 SCD5Q86SK9 330 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 KBTBD6Q86V97 674 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 PIGZQ86VD9 579 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 TTC30AQ86WT1 665 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 MIB1Q86YT6 1006 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 LOXL4Q96JB6 756 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 NT5C1BQ96P26 610 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 SEMA4GQ9NTN9 838 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 DLL3Q9NYJ7 618 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 WDR35Q9P2L0 1181 aa20.71■□□□□ 0.91
VCP-203ENST00000448530 PPP1R3GB7ZBB8 358 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 MDM4O15151 490 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 TULP3O75386 442 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 KLF8O95600 359 aaPredicted RBP20.7■□□□□ 0.9
VCP-203ENST00000448530 BCAT1P54687 386 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 MORC3Q14149 939 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 ELF2Q15723 593 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 EOGTQ5NDL2 527 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 TTI2Q6NXR4 508 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 FOXR2Q6PJQ5 311 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 RSRC2Q7L4I2 434 aaKnown RBP20.7■□□□□ 0.9
VCP-203ENST00000448530 ETFBKMTQ8IXQ9 262 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 ZNF276Q8N554 614 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 ALLCQ8N6M5 410 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 XPO6Q96QU8 1125 aaKnown RBP20.7■□□□□ 0.9
VCP-203ENST00000448530 BBS2Q9BXC9 721 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 RASAL2Q9UJF2 1139 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 KIAA1257Q9ULG3 409 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 STRIP2Q9ULQ0 834 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 SDK1Q7Z5N4 2213 aa20.7■□□□□ 0.9
VCP-203ENST00000448530 A0A0A0MRY4 1105 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 NEDD8-MDP1E9PL57 170 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 GNA14O95837 355 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 VDRP11473 427 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 TKTL1P51854 596 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 COG7P83436 770 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 MESP2Q0VG99 397 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 PAK1Q13153 545 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 CRY1Q16526 586 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 USP39Q53GS9 565 aaKnown RBP20.69■□□□□ 0.9
VCP-203ENST00000448530 GRAMD4Q6IC98 578 aa20.69■□□□□ 0.9
VCP-203ENST00000448530 ANO7Q6IWH7 933 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms