RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 CNGB3Q9NQW8 809 aa17.2■□□□□ 0.34
SF3A1-204ENST00000447376 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
SF3A1-204ENST00000447376 OLA1Q9NTK5 396 aaKnown RBP17.2■□□□□ 0.34
SF3A1-204ENST00000447376 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
SF3A1-204ENST00000447376 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
SF3A1-204ENST00000447376 SART1O43290 800 aaKnown RBP17.19■□□□□ 0.34
SF3A1-204ENST00000447376 FBXO21O94952 628 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 IRF1P10914 325 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 LCP1P13796 627 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 TARSP26639 723 aaKnown RBP17.19■□□□□ 0.34
SF3A1-204ENST00000447376 KRT9P35527 623 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 ACADSBP45954 432 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 RPS9P46781 194 aaKnown RBP17.19■□□□□ 0.34
SF3A1-204ENST00000447376 SOX9P48436 509 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 COG7P83436 770 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 GRSF1Q12849 480 aaKnown RBP eCLIP17.19■□□□□ 0.34
SF3A1-204ENST00000447376 PPP2R5DQ14738 602 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 DGKKQ5KSL6 1271 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 KLHDC7AQ5VTJ3 777 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 ZNF276Q8N554 614 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 NOX5Q96PH1 765 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 IER2Q9BTL4 223 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 PDCL3Q9H2J4 239 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 HPS4Q9NQG7 708 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 ZDBF2Q9HCK1 2354 aa17.19■□□□□ 0.34
SF3A1-204ENST00000447376 MIA3Q5JRA6 1907 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 ADH1CP00326 375 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 ARSAP15289 507 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 RGS7P49802 495 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 PON2Q15165 354 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 SYCP1Q15431 976 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 EML3Q32P44 896 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 PM20D1Q6GTS8 502 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 APTXQ7Z2E3 356 aaKnown RBP17.18■□□□□ 0.34
SF3A1-204ENST00000447376 MIB1Q86YT6 1006 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 SCML4Q8N228 414 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 CCDC26Q8TAB7 109 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 SLC35F5Q8WV83 523 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 ZNF606Q8WXB4 792 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 FAM122AQ96E09 287 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 ERGIC2Q96RQ1 377 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 TRIM62Q9BVG3 475 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 NMUR1Q9HB89 426 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 SIX2Q9NPC8 291 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
SF3A1-204ENST00000447376 ABCC13Q9NSE7 274 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 SPATA6Q9NWH7 488 aaPredicted RBP17.18■□□□□ 0.34
SF3A1-204ENST00000447376 RAPGEFL1Q9UHV5 662 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 RASAL2Q9UJF2 1139 aa17.18■□□□□ 0.34
SF3A1-204ENST00000447376 MTF2Q9Y483 593 aaPredicted RBP17.18■□□□□ 0.34
SF3A1-204ENST00000447376 TULP2O00295 520 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 LAMTOR5O43504 91 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 TBX18O95935 607 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 TPM3P06753 285 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 COL4A2P08572 1712 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 UCHL3P15374 230 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 APBA1Q02410 837 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 EFEMP1Q12805 493 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 PKDCCQ504Y2 493 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 PMF1Q6P1K2 205 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 RIN3Q8TB24 985 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 IRGQQ8WZA9 623 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 CLDN23Q96B33 292 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 P2RY13Q9BPV8 354 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 LMAN1LQ9HAT1 526 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 FAM207AQ9NSI2 230 aaPredicted RBP17.17■□□□□ 0.34
SF3A1-204ENST00000447376 KIF26AQ9ULI4 1882 aaPredicted RBP17.17■□□□□ 0.34
SF3A1-204ENST00000447376 ZNF510Q9Y2H8 683 aa17.17■□□□□ 0.34
SF3A1-204ENST00000447376 ZNF318Q5VUA4 2279 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 A0A1B0GTH6 734 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 GJA4P35212 333 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 UBASH3AP57075 661 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 FANCCQ00597 558 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 DRAP1Q14919 205 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-204ENST00000447376 ANGPT1Q15389 498 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 PREPLQ4J6C6 727 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-204ENST00000447376 SCD5Q86SK9 330 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 C1orf210Q8IVY1 113 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 SYNPOQ8N3V7 929 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 PRSS33Q8NF86 280 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 STK32AQ8WU08 396 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 ATOH1Q92858 354 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-204ENST00000447376 SPAG5Q96R06 1193 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 KLF16Q9BXK1 252 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-204ENST00000447376 STK33Q9BYT3 514 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 LINC00597Q9H2U6 94 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 OSER1Q9NX31 292 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 NUDT5Q9UKK9 219 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
SF3A1-204ENST00000447376 FOXN3O00409 490 aaPredicted RBP17.15■□□□□ 0.34
SF3A1-204ENST00000447376 CALCAP01258 141 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 DRD1P21728 446 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 GPD2P43304 727 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 DAOAP59103 153 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 ZXDBP98169 803 aa17.15■□□□□ 0.34
SF3A1-204ENST00000447376 GAD2Q05329 585 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms