RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 ENO4A6NNW6 628 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 H3BRJ5 948 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 ACKR2O00590 384 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 BIRC5O15392 142 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 KCNN4O15554 427 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 TM7SF2O76062 418 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 KCNA3P22001 575 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 AMPD1P23109 780 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 TCF7P36402 384 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 MAGEA3P43357 314 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 ATF7IP2Q5U623 682 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 CES4AQ5XG92 561 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 EP400NLQ6ZTU2 488 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 NUDCD3Q8IVD9 361 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 ARID3BQ8IVW6 561 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 FAM161BQ96MY7 647 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 TSC22D3Q99576 134 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 C1orf21Q9H246 121 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 PPARGC1AQ9UBK2 798 aaKnown RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 DNAJB4Q9UDY4 337 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SLC15A5A6NIM6 579 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SPDYE16A6NNV3 312 aaPredicted RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 M0QYV0 167 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 PRPSAP2O60256 369 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 ENO1P06733 434 aaKnown RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 KRT19P08727 400 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 CRHR1P34998 444 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 CHI3L2Q15782 390 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 GSTA3Q16772 222 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 DNAL1Q4LDG9 190 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SH3PXD2AQ5TCZ1 1133 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 CRLF3Q8IUI8 442 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SCUBE1Q8IWY4 988 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 EXOC8Q8IYI6 725 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SEPT1Q8WYJ6 367 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 USP6NLQ92738 828 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 GATA6Q92908 595 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 ACAP3Q96P50 834 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 FZD8Q9H461 694 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 CYP3A43Q9HB55 503 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SMYD2Q9NRG4 433 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 ETNK2Q9NVF9 386 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 DDX43Q9NXZ2 648 aaKnown RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 HMGXB4Q9UGU5 601 aa19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.81■□□□□ 0.76
SDCBP-204ENST00000447182 SPECC1L-ADORA2AF8WAN1 911 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 IL4RP24394 825 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 ORC1Q13415 861 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 DBN1Q16643 649 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 TRNP1Q6NT89 227 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 C1orf228Q6PIY5 440 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 C4orf22Q6V702 233 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 C1orf127Q8N9H9 656 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 TEKT4Q8WW24 435 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 RXFP2Q8WXD0 754 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 CCDC106Q9BWC9 280 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 SMYD3Q9H7B4 428 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 VRTNQ9H8Y1 702 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 AFG3L2Q9Y4W6 797 aa19.8■□□□□ 0.76
SDCBP-204ENST00000447182 MAGEA13PA6NCF6 341 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 FAM159BA6NKW6 160 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SMIM24O75264 130 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 BPGMP07738 259 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 VDRP11473 427 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 PDGFRAP16234 1089 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 CPA2P48052 419 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 ACTR3P61158 418 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 WASHC5Q12768 1159 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 NBPF20Q3BBV1 942 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SLC9A4Q6AI14 798 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 UNC5AQ6ZN44 842 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 ARCQ7LC44 396 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 MYLK4Q86YV6 388 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-204ENST00000447182 CEP120Q8N960 986 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SPDYE1Q8NFV5 336 aaPredicted RBP19.79■□□□□ 0.76
SDCBP-204ENST00000447182 WRNIP1Q96S55 665 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SH3GL3Q99963 347 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 MIS12Q9H081 205 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 RPF1Q9H9Y2 349 aaKnown RBP19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SORCS3Q9UPU3 1222 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 HBS1LQ9Y450 684 aaKnown RBP19.79■□□□□ 0.76
SDCBP-204ENST00000447182 WASF2Q9Y6W5 498 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 APOL1O14791 398 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 ZBED1O96006 694 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SERPINA6P08185 405 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 EDNRBP24530 442 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 RBL1P28749 1068 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SERPINB9P50453 376 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 AQP5P55064 265 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 OSTNP61366 133 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 KRT81Q14533 505 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 BOLA3Q53S33 107 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 C6orf163Q5TEZ5 329 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 METTL7BQ6UX53 244 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 TIFABQ6ZNK6 161 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 KBTBD2Q8IY47 623 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 PQLC3Q8N755 202 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 FBXO27Q8NI29 283 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 KAT6AQ92794 2004 aa19.79■□□□□ 0.76
SDCBP-204ENST00000447182 SIKE1Q9BRV8 207 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms