RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 ARMCX3Q9UH62 379 aaPredicted RBP21.87■■□□□ 1.09
SDC1-205ENST00000447124 SPAG17Q6Q759 2223 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 SPTBN2O15020 2390 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 DCLK1O15075 740 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 TRIM24O15164 1050 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 LRP3O75074 770 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 APBB3O95704 486 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 KIR2DL1P43626 348 aaPredicted RBP21.86■■□□□ 1.09
SDC1-205ENST00000447124 MRPS21P82921 87 aaKnown RBP21.86■■□□□ 1.09
SDC1-205ENST00000447124 LMNB2Q03252 620 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 TMEM92Q6UXU6 159 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 DGLUCYQ7Z3D6 616 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 TTC39CQ8N584 583 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 CCDC26Q8TAB7 109 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 GTPBP4Q9BZE4 634 aaKnown RBP21.86■■□□□ 1.09
SDC1-205ENST00000447124 UBXN6Q9BZV1 441 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 ARHGEF4Q9NR80 690 aa21.86■■□□□ 1.09
SDC1-205ENST00000447124 HOOK1Q9UJC3 728 aaKnown RBP21.86■■□□□ 1.09
SDC1-205ENST00000447124 EML5Q05BV3 1969 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 PRR5-ARHGAP8B1AHC4 643 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 HOXC11O43248 304 aaPredicted RBP21.85■■□□□ 1.09
SDC1-205ENST00000447124 APODP05090 189 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 CCDC192P0DO97 292 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 TIE1P35590 1138 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 GRIA2P42262 883 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 ARHGAP8P85298 464 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 KDSRQ06136 332 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 LRMPQ12912 555 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 CUL2Q13617 745 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 CSRP2Q16527 193 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 KLHDC10Q6PID8 442 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 CCDC186Q7Z3E2 898 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 PIGZQ86VD9 579 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 TTC30AQ86WT1 665 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 ZNF276Q8N554 614 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 UBR7Q8N806 425 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 IL17RCQ8NAC3 791 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 ZC3H10Q96K80 434 aaKnown RBP21.85■■□□□ 1.09
SDC1-205ENST00000447124 ZDHHC4Q9NPG8 344 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 NAGPAQ9UK23 515 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 HCN2Q9UL51 889 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 MMP17Q9ULZ9 603 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 ABCA7Q8IZY2 2146 aa21.85■■□□□ 1.09
SDC1-205ENST00000447124 TULP2O00295 520 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 PSMA7O14818 248 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 TULP3O75386 442 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 TNFRSF4P43489 277 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 PLA2G4AP47712 749 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 MORC3Q14149 939 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 CRY1Q16526 586 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 ANO4Q32M45 955 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 PLK5Q496M5 336 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 RAB41Q5JT25 222 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 TTI2Q6NXR4 508 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 ALLCQ8N6M5 410 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 ANKRD52Q8NB46 1076 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 TXNDC5Q8NBS9 432 aaKnown RBP21.84■■□□□ 1.09
SDC1-205ENST00000447124 TSTD1Q8NFU3 115 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 P2RY11Q96G91 374 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 CEP63Q96MT8 703 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 DNAI2Q9GZS0 605 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 DUSP15Q9H1R2 295 aaPredicted RBP21.84■■□□□ 1.09
SDC1-205ENST00000447124 ARRDC1-AS1Q9H2J1 176 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 FAM124BQ9H5Z6 455 aaPredicted RBP21.84■■□□□ 1.09
SDC1-205ENST00000447124 INVSQ9Y283 1065 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 RALGAPA1Q6GYQ0 2036 aa21.84■■□□□ 1.09
SDC1-205ENST00000447124 KIAA1549LQ6ZVL6 1849 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 MED19A0JLT2 244 aaPredicted RBP21.83■■□□□ 1.09
SDC1-205ENST00000447124 SGK1O00141 431 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 KLF8O95600 359 aaPredicted RBP21.83■■□□□ 1.09
SDC1-205ENST00000447124 FMO5P49326 533 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 DGKEP52429 567 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 CCDC6Q16204 474 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 C10orf120Q5SQS8 335 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 KLHL10Q6JEL2 608 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 PRR23CQ6ZRP0 262 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 RASSF3Q86WH2 238 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 NDRG1Q92597 394 aaKnown RBP21.83■■□□□ 1.09
SDC1-205ENST00000447124 LOXL4Q96JB6 756 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 METTL14Q9HCE5 456 aaKnown RBP21.83■■□□□ 1.09
SDC1-205ENST00000447124 CLIC5Q9NZA1 410 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 DNMT3LQ9UJW3 386 aa21.83■■□□□ 1.09
SDC1-205ENST00000447124 TBC1D3BA6NDS4 549 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.82■■□□□ 1.08
SDC1-205ENST00000447124 BIN1O00499 593 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 GDF9O60383 454 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 ADAM23O75077 832 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 EPN2O95208 641 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 KLKB1P03952 638 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 PSEN1P49768 467 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 STIM1Q13586 685 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 Q6ZNB5 142 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 LMO3Q8TAP4 145 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 NELFBQ8WX92 580 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 TPSD1Q9BZJ3 242 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 DEC1Q9P2X7 70 aa21.82■■□□□ 1.08
SDC1-205ENST00000447124 PMM2O15305 246 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 STC2O76061 302 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 PDE4CQ08493 712 aa21.81■■□□□ 1.08
SDC1-205ENST00000447124 BTBD8Q5XKL5 378 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms