RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 TTLL4Q14679 1199 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 CAND1Q86VP6 1230 aaKnown RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 SRPK1Q96SB4 655 aaKnown RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 TMEM120AQ9BXJ8 343 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 SLC13A1Q9BZW2 595 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 POPDC2Q9HBU9 364 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 SMYD2Q9NRG4 433 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 ARL8BQ9NVJ2 186 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 NR2E3Q9Y5X4 410 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 F5H423 210 aaPredicted RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 TSHRP16473 764 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 RASSF2P50749 326 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 ARFIP2P53365 341 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 RBP5P82980 135 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 SLC18A2Q05940 514 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 PRKD1Q15139 912 aaPredicted RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 RFWD3Q6PCD5 774 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 SLC26A11Q86WA9 606 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 MAP7D3Q8IWC1 876 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 CLEC4CQ8WTT0 213 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
TRO-215ENST00000445561 FAXDC2Q96IV6 333 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 ACAP3Q96P50 834 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 DENND2DQ9H6A0 471 aaPredicted RBP13.1□□□□□ -0.31
TRO-215ENST00000445561 RNPEPL1Q9HAU8 725 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 ETNK2Q9NVF9 386 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 SLC5A4Q9NY91 659 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 ITGA11Q9UKX5 1188 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 GINS2Q9Y248 185 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 NME7Q9Y5B8 376 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 SNX9Q9Y5X1 595 aa13.1□□□□□ -0.31
TRO-215ENST00000445561 COPEO14579 308 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 GABBR2O75899 941 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 WFS1O76024 890 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 OSBPP22059 807 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 PTPN4P29074 926 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 SDC4P31431 198 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 SERPINB4P48594 390 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 ARHGAP1Q07960 439 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 TTC7BQ86TV6 843 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 ZNF398Q8TD17 642 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 NUDCD1Q96RS6 583 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 LBHD1Q9BQE6 289 aaPredicted RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 FAM237BA0A1B0GVD1 139 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 PAPSS1O43252 624 aaPredicted RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 TSPAN1O60635 241 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 HAUS5O94927 633 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 METTL18O95568 372 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 DLDP09622 509 aaKnown RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 HDAC4P56524 1084 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 GBE1Q04446 702 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 ZBTB16Q05516 673 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 TTC39BQ5VTQ0 682 aaPredicted RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 TRMT10BQ6PF06 316 aaKnown RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 IQCGQ9H095 443 aaKnown RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 ZNF395Q9H8N7 513 aaPredicted RBP13.09□□□□□ -0.31
TRO-215ENST00000445561 CNTN3Q9P232 1028 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 MAD1L1Q9Y6D9 718 aa13.09□□□□□ -0.31
TRO-215ENST00000445561 CCDC195A0A1B0GUA6 201 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 EIF4E1BA6NMX2 242 aaKnown RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 TRAFD1O14545 582 aaPredicted RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 CYB561D2O14569 222 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CSH1P0DML2 217 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CSH2P0DML3 217 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 MYL2P10916 166 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 GRIA1P42261 906 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 MRPS5P82675 430 aaKnown RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 SLC10A2Q12908 348 aaPredicted RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 PDK2Q15119 407 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 BOLA3Q53S33 107 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 SLC9A4Q6AI14 798 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 ARMCX2Q7L311 632 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CHSY1Q86X52 802 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 C7orf31Q8N865 590 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 PPP1R13LQ8WUF5 828 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 AFG1LQ8WV93 481 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CADM1Q9BY67 442 aaKnown RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 KLC2Q9H0B6 622 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 ARMCX1Q9P291 453 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 OTOFQ9HC10 1997 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 SLC15A5A6NIM6 579 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 SPAG6O75602 509 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 TOP3BO95985 862 aaKnown RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 TPBGLP0DKB5 382 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 GNAZP19086 355 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 TGM2P21980 687 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CALB2P22676 271 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CYP2F1P24903 491 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 IREB2P48200 963 aaKnown RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 SLC6A3Q01959 620 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 TMEM62Q0P6H9 643 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
TRO-215ENST00000445561 ZNF484Q5JVG2 852 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
TRO-215ENST00000445561 CES4AQ5XG92 561 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms