RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 LACTBL1A8MY62 500 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 AIM2O14862 343 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 TYROBPO43914 113 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 WFS1O76024 890 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 TXNP10599 105 aaKnown RBP12.31□□□□□ -0.44
MSH6-204ENST00000445503 PHKA2P46019 1235 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 ZNF252P-AS1Q0IIN9 211 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 FASTKD1Q53R41 847 aaKnown RBP12.31□□□□□ -0.44
MSH6-204ENST00000445503 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 WDR60Q8WVS4 1066 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 NT5C1AQ9BXI3 368 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 TAGLN3Q9UI15 199 aa12.31□□□□□ -0.44
MSH6-204ENST00000445503 ZBTB7AO95365 584 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 AMPD1P23109 780 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 GCAP28676 217 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 DNAL1Q4LDG9 190 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 JADE1Q6IE81 842 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 ANO7Q6IWH7 933 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 ZPBP2Q6X784 338 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 XIRP1Q702N8 1843 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 TMPRSS6Q8IU80 811 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 IL1RAPL1Q9NZN1 696 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 C2CD2Q9Y426 696 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 PRR5-ARHGAP8B1AHC4 643 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
MSH6-204ENST00000445503 VTNP04004 478 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 T-ENOLP0DO92 83 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 ACADSP16219 412 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 GM2AP17900 193 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 RTP1P59025 263 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 ARHGAP8P85298 464 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 ST13P4Q8IZP2 240 aaPredicted RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 NAT8LQ8N9F0 302 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 USP6NLQ92738 828 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 OTUD5Q96G74 571 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 HMGXB4Q9UGU5 601 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 WDR27A2RRH5 827 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
MSH6-204ENST00000445503 BOLA3Q53S33 107 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 DALRD3Q5D0E6 543 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 TCHHL1Q5QJ38 904 aaPredicted RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 N4BP2L1Q5TBK1 243 aaPredicted RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 RIPOR1Q6ZS17 1223 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 FAM131BQ86XD5 332 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 TMEM192Q8IY95 271 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 RBM15BQ8NDT2 890 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 PPP1R13LQ8WUF5 828 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 COPS5Q92905 334 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 ACO2Q99798 780 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 XAB2Q9HCS7 855 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 A0A087WZ62 844 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 GOLGA8QA0A0J9YX86 632 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 GOLGA8OA6NCC3 632 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 GOLGA8NF8WBI6 632 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 TOP3BO95985 862 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 PAPOLAP51003 745 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 FKBP1CQ5VVH2 108 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 HACE1Q8IYU2 909 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 SLC44A1Q8WWI5 657 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 MMP19Q99542 508 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 FDXACB1Q9BRP7 624 aaPredicted RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 SNX25Q9H3E2 840 aa12.3□□□□□ -0.44
MSH6-204ENST00000445503 DHX33Q9H6R0 707 aaKnown RBP12.3□□□□□ -0.44
MSH6-204ENST00000445503 CXorf49A8MYA2 514 aaPredicted RBP12.29□□□□□ -0.44
MSH6-204ENST00000445503 E9PBE3 544 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 KLHL41O60662 606 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 TBX10O75333 385 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 PTPRAP18433 802 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 FBXO16Q8IX29 292 aaPredicted RBP12.29□□□□□ -0.44
MSH6-204ENST00000445503 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 MIPEPQ99797 713 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 APOL2Q9BQE5 337 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 DNAI2Q9GZS0 605 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 ZCWPW1Q9H0M4 648 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 ACSS2Q9NR19 701 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 ETNK2Q9NVF9 386 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 LAMB2P55268 1798 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 MAGEA13PA6NCF6 341 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 E7ENQ6 273 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 SMAPO00193 183 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 RGS20O76081 388 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 APOEP02649 317 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
MSH6-204ENST00000445503 FGFR1P11362 822 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 TCN1P20061 433 aaPredicted RBP12.29□□□□□ -0.44
MSH6-204ENST00000445503 CYP2F1P24903 491 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 MMEL1Q495T6 779 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 TRMT10BQ6PF06 316 aaKnown RBP12.29□□□□□ -0.44
MSH6-204ENST00000445503 DRICH1Q6PGQ1 229 aaPredicted RBP12.29□□□□□ -0.44
MSH6-204ENST00000445503 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 FAM183BPQ6ZVS7 135 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 CCNYL1Q8N7R7 359 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 RAB3IL1Q8TBN0 382 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 USP12O75317 370 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 NPTXRO95502 500 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 STAMBPO95630 424 aa12.29□□□□□ -0.44
MSH6-204ENST00000445503 VDRP11473 427 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms