RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 LY6KQ17RY6 165 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 GLRA4Q5JXX5 417 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 ZC3H3Q8IXZ2 948 aaKnown RBP17.19■□□□□ 0.34
TCOF1-206ENST00000445265 GPRC5AQ8NFJ5 357 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 ZDHHC18Q9NUE0 388 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 SOX13Q9UN79 622 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 RPTORQ8N122 1335 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 C5orf60A6NFR6 353 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 TRPC5OSA6NMA1 111 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 EDF1O60869 148 aaKnown RBP17.19■□□□□ 0.34
TCOF1-206ENST00000445265 SERPINE1P05121 402 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 GPR162Q16538 588 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 COLGALT1Q8NBJ5 622 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 ANXA9O76027 345 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 CCNE2O96020 404 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 NUDT2P50583 147 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 CPB2Q96IY4 423 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 DDIT4Q9NX09 232 aa17.19■□□□□ 0.34
TCOF1-206ENST00000445265 DNM1LO00429 736 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 F9P00740 461 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 UBA1P22314 1058 aaKnown RBP17.18■□□□□ 0.34
TCOF1-206ENST00000445265 DDIASQ8IXT1 998 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 PCYOX1LQ8NBM8 494 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ABTB1Q969K4 478 aaPredicted RBP17.18■□□□□ 0.34
TCOF1-206ENST00000445265 CATSPERBQ9H7T0 1116 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 C10orf88Q9H8K7 445 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 EFR3BQ9Y2G0 817 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 MYH8P13535 1937 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 LACTBL1A8MY62 500 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 CHRNB2P17787 502 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 AMHR2Q16671 573 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 IPMKQ8NFU5 416 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 SLCO1B3Q9NPD5 702 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.18■□□□□ 0.34
TCOF1-206ENST00000445265 SPATA31C2B4DYI2 1134 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 F8W8V4 182 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ANGPT2O15123 496 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 VTNP04004 478 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 TMED1Q13445 227 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 INPP5AQ14642 412 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 KYAT3Q6YP21 454 aaKnown RBP17.18■□□□□ 0.34
TCOF1-206ENST00000445265 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 DTNBP1Q96EV8 351 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 COQ4Q9Y3A0 265 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 DTNAQ9Y4J8 743 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 C2CD2LO14523 706 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 INSRRP14616 1297 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 PTPRAP18433 802 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 RBL1P28749 1068 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 GP5P40197 560 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 PEX5P50542 639 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ZNF143P52747 638 aaPredicted RBP17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ENPEPQ07075 957 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 CAPSQ13938 189 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 PARP6Q2NL67 630 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 N4BP2L1Q5TBK1 243 aaPredicted RBP17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ZDHHC24Q6UX98 284 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 KDELC2Q7Z4H8 507 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 ERO1BQ86YB8 467 aa17.18■□□□□ 0.34
TCOF1-206ENST00000445265 SLC6A3Q01959 620 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 STRA8Q7Z7C7 330 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 CCDC33Q8N5R6 958 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.17■□□□□ 0.34
TCOF1-206ENST00000445265 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 IL1RAPL1Q9NZN1 696 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 NDUFA13Q9P0J0 144 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
TCOF1-206ENST00000445265 GFAPP14136 432 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 NSUN2Q08J23 767 aaKnown RBP eCLIP17.17■□□□□ 0.34
TCOF1-206ENST00000445265 CCDC15Q0P6D6 951 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 STX5Q13190 355 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 LAMB3Q13751 1172 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 ZNF235Q14590 738 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 FRA10AC1Q70Z53 315 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 MON1BQ7L1V2 547 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 KATNAL1Q9BW62 490 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.17■□□□□ 0.34
TCOF1-206ENST00000445265 LGALS13Q9UHV8 139 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 A0A0B4J269 797 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 E5RJQ4 531 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 SLCO1B7G3V0H7 640 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 NCAM2O15394 837 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 HSPA13P48723 471 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 CYTH1Q15438 398 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 IZUMO2Q6UXV1 221 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 KAT2BQ92831 832 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 ING2Q9H160 280 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 LRFN2Q9ULH4 789 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 ZMYM2Q9UBW7 1377 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 MAFO75444 373 aaPredicted RBP17.17■□□□□ 0.34
TCOF1-206ENST00000445265 IL1RL1Q01638 556 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 LRRC74BQ6ZQY2 392 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 STKLD1Q8NE28 680 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 EFCAB1Q9HAE3 211 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 LRRC4CQ9HCJ2 640 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 ARMCX1Q9P291 453 aa17.17■□□□□ 0.34
TCOF1-206ENST00000445265 PRPF4O43172 522 aaKnown RBP eCLIP17.16■□□□□ 0.34
TCOF1-206ENST00000445265 MPP3Q13368 585 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms