RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 TAF10Q12962 218 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 HTR4Q13639 388 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 RAB41Q5JT25 222 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 FAM183BPQ6ZVS7 135 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 CCDC170Q8IYT3 715 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 CCDC112Q8NEF3 446 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 C18orf8Q96DM3 657 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 RPP25Q9BUL9 199 aaKnown RBP18.07■□□□□ 0.48
LIME1-202ENST00000444951 IRF2BPLQ9H1B7 796 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 FBXO44Q9H4M3 255 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 ASAH2Q9NR71 780 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 GMIPQ9P107 970 aa18.07■□□□□ 0.48
LIME1-202ENST00000444951 DNMT3BQ9UBC3 853 aaKnown RBP18.07■□□□□ 0.48
LIME1-202ENST00000444951 CHORDC1Q9UHD1 332 aaPredicted RBP18.07■□□□□ 0.48
LIME1-202ENST00000444951 EPN1Q9Y6I3 576 aaPredicted RBP18.07■□□□□ 0.48
LIME1-202ENST00000444951 ANHXE9PGG2 379 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
LIME1-202ENST00000444951 ATMINO43313 823 aaPredicted RBP18.06■□□□□ 0.48
LIME1-202ENST00000444951 NDUFA10O95299 355 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 GZMAP12544 262 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 MMP8P22894 467 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 NBL1P41271 181 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 SPA17Q15506 151 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 MON1BQ7L1V2 547 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 TMEM110Q86TL2 294 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 PHF13Q86YI8 300 aaPredicted RBP18.06■□□□□ 0.48
LIME1-202ENST00000444951 CCDC105Q8IYK2 499 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 MCOLN2Q8IZK6 566 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 ZNF653Q96CK0 615 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 CEP295NLQ96MC4 621 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 DESI2Q9BSY9 194 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 EHD2Q9NZN4 543 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 MYO1AQ9UBC5 1043 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 NUMBLQ9Y6R0 609 aa18.06■□□□□ 0.48
LIME1-202ENST00000444951 ZNF263O14978 683 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 GRAP2O75791 330 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 IPO7O95373 1038 aaKnown RBP18.05■□□□□ 0.48
LIME1-202ENST00000444951 CALB1P05937 261 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 RHOP08100 348 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 SRFP11831 508 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 GJA1P17302 382 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 FSHRP23945 695 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 GABRR2P28476 465 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 DAOAP59103 153 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 CCZ1BP86790 482 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 CCZ1P86791 482 aaPredicted RBP18.05■□□□□ 0.48
LIME1-202ENST00000444951 C1QBPQ07021 282 aaKnown RBP18.05■□□□□ 0.48
LIME1-202ENST00000444951 PABPC1LQ4VXU2 614 aaKnown RBP18.05■□□□□ 0.48
LIME1-202ENST00000444951 XYLT1Q86Y38 959 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 DTWD2Q8NBA8 298 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 ACRBPQ8NEB7 543 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 ITFG1Q8TB96 612 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 FAM149B1Q96BN6 582 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 SLITRK1Q96PX8 696 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 TTLL2Q9BWV7 592 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 PACSIN1Q9BY11 444 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 ISCUQ9H1K1 167 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 CYLDQ9NQC7 956 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 CNGB3Q9NQW8 809 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.05■□□□□ 0.482e-14■■□□□ 12.7
LIME1-202ENST00000444951 WNT16Q9UBV4 365 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 SCML2Q9UQR0 700 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 USP3Q9Y6I4 520 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 MYO16Q9Y6X6 1858 aa18.05■□□□□ 0.48
LIME1-202ENST00000444951 WDR87Q6ZQQ6 2873 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 A0A1W2PQH9 124 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 PRR23AA6NEV1 266 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 YJEFN3A6XGL0 299 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 EIF3CLB5ME19 914 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 E7ENQ6 273 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 FBXO21O94952 628 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 GJB6O95452 261 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 MAGEA1P43355 309 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 GABRB2P47870 512 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 RPL34P49207 117 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 PGFP49763 221 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 GALCP54803 685 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 RNASE9P60153 205 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 PTP4A2Q12974 167 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 TAF5Q15542 800 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 FAM102AQ5T9C2 384 aaPredicted RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 PPP1R2P3Q6NXS1 205 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 PARM1Q6UWI2 310 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 TOGARAM2Q6ZUX3 1019 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 PDZD4Q76G19 769 aaPredicted RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 TMC8Q8IU68 726 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 FGF14Q92915 247 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 TCEAL4Q96EI5 215 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 TRMT2BQ96GJ1 504 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 PIWIL1Q96J94 861 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 GCNAQ96QF7 691 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 EIF3CQ99613 913 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 KCNF1Q9H3M0 494 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 TBC1D17Q9HA65 648 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 COMMD8Q9NX08 183 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 IL37Q9NZH6 218 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 TRPM5Q9NZQ8 1165 aa18.04■□□□□ 0.48
LIME1-202ENST00000444951 UXTQ9UBK9 157 aaPredicted RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 CNOT8Q9UFF9 292 aaKnown RBP18.04■□□□□ 0.48
LIME1-202ENST00000444951 STRIP2Q9ULQ0 834 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms