RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 POMPQ9Y244 141 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TMEM98Q9Y2Y6 226 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 CLOCKO15516 846 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DCXO43602 365 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 BCAS2O75934 225 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 KRT3P12035 628 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 MYL4P12829 197 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DLG4P78352 724 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 MOXD1Q6UVY6 613 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 C16orf86Q6ZW13 317 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 BHLHE22Q8NFJ8 381 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 GNEQ9Y223 722 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 PXDNQ92626 1479 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TGFB1I1O43294 461 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 ZBED1O96006 694 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 POLR2EP19388 210 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 GRIA2P42262 883 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 GK3PQ14409 553 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 HADHQ16836 314 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 MSS51Q4VC12 460 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 PHTF2Q8N3S3 785 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 EFHD2Q96C19 240 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 IMPG2Q9BZV3 1241 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 VPS51Q9UID3 782 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SNX13Q9Y5W8 968 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 G3V3G9 751 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 KCNA4P22459 653 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 MSX2P35548 267 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 PPP3CAQ08209 521 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 CEP55Q53EZ4 464 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DCAF8Q5TAQ9 597 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TTC30AQ86WT1 665 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 TAS1R2Q8TE23 839 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 CDKL2Q92772 493 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 DLG3Q92796 817 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 KREMEN1Q96MU8 473 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 FAM32AQ9Y421 112 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 MSH4O15457 936 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SEC24DO94855 1032 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 PIM1P11309 404 aaPredicted RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 ITGAXP20702 1163 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SNRNP35Q16560 246 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 FBXO11Q86XK2 927 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 SEMA4DQ92854 862 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 KLC2Q9H0B6 622 aa5.19□□□□□ -1.58
HERC1-201ENST00000443617 WARS2Q9UGM6 360 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 RBMX2Q9Y388 322 aaKnown RBP5.19□□□□□ -1.58
HERC1-201ENST00000443617 GSTT2P0CG29 244 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 GSTT2BP0CG30 244 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 RXRGP48443 463 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DPYSL3Q14195 570 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 INPP5AQ14642 412 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 NFIL3Q16649 462 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CYP2W1Q8TAV3 490 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DCAF4Q8WV16 495 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 COQ7Q99807 217 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 EFCAB1Q9HAE3 211 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TUFT1Q9NNX1 390 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 ZNF804BA4D1E1 1349 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 BUD23O43709 281 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 CST8O60676 142 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SSTR3P32745 418 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 TRAF2Q12933 501 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CCDC14Q49A88 953 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SLC9A9Q8IVB4 645 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 KCTD17Q8N5Z5 321 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TMA16Q96EY4 203 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 CALCAP01258 141 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CYP19A1P11511 503 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 GCAP28676 217 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PICALMQ13492 652 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PIGHQ14442 188 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 DEPDC1Q5TB30 811 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SFRP1Q8N474 314 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 DDX17Q92841 729 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 HPS1Q92902 700 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 C1orf21Q9H246 121 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 STK39Q9UEW8 545 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CDYLQ9Y232 598 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 LYPLA1O75608 230 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 PEX6Q13608 980 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 PRKD1Q15139 912 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 C2CD6Q53TS8 623 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SHC3Q92529 594 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CNDP1Q96KN2 507 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 AGAP3Q96P47 875 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 ING2Q9H160 280 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 RAD21L1Q9H4I0 556 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 C20orf96Q9NUD7 363 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 SLITRK3O94933 977 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 GYS1P13807 737 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 MX2P20592 715 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 SNAP25P60880 206 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 ROBO3Q96MS0 1386 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 MICAL3Q7RTP6 2002 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 GPC4O75487 556 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 CSDE1O75534 798 aaKnown RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 TCN1P20061 433 aaPredicted RBP5.18□□□□□ -1.58
HERC1-201ENST00000443617 ME2P23368 584 aa5.18□□□□□ -1.58
HERC1-201ENST00000443617 TTKP33981 857 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms