RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 IER5LQ5T953 404 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 BSPRYQ5W0U4 402 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 HGSNATQ68CP4 663 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 FAM183BPQ6ZVS7 135 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 ZNF571Q7Z3V5 609 aaPredicted RBP16.81■□□□□ 0.28
USP39-205ENST00000442708 MFSD6LQ8IWD5 586 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 CELF5Q8N6W0 485 aaKnown RBP16.81■□□□□ 0.28
USP39-205ENST00000442708 SLC30A5Q8TAD4 765 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 SH3RF2Q8TEC5 729 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 IRGQQ8WZA9 623 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 EDEM1Q92611 657 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 ASIC4Q96FT7 647 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 HAUS4Q9H6D7 363 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 OBP2AQ9NY56 170 aa16.81■□□□□ 0.28
USP39-205ENST00000442708 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.81■□□□□ 0.28
USP39-205ENST00000442708 LEFTY2O00292 366 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 LTFP02788 710 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 PSEN1P49768 467 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 FCHO2Q0JRZ9 810 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 TBX2Q13207 712 aaPredicted RBP16.8■□□□□ 0.28
USP39-205ENST00000442708 CLEC16AQ2KHT3 1053 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 C10orf120Q5SQS8 335 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 OLFML1Q6UWY5 402 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 ARHGAP18Q8N392 663 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 ZNF276Q8N554 614 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 BPIFB1Q8TDL5 484 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 IQCDQ96DY2 449 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 ZFYVE19Q96K21 471 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 KLF16Q9BXK1 252 aaPredicted RBP16.8■□□□□ 0.28
USP39-205ENST00000442708 DUSP12Q9UNI6 340 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 LUC7L2Q9Y383 392 aaKnown RBP16.8■□□□□ 0.28
USP39-205ENST00000442708 CEP83Q9Y592 693 aa16.8■□□□□ 0.28
USP39-205ENST00000442708 DPYSL4O14531 572 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 SCAMP3O14828 347 aaKnown RBP16.79■□□□□ 0.28
USP39-205ENST00000442708 DCXO43602 365 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 PLEKP08567 350 aaPredicted RBP16.79■□□□□ 0.28
USP39-205ENST00000442708 SRFP11831 508 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 TCF3P15923 654 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 PSMC3P17980 439 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
USP39-205ENST00000442708 GABRB2P47870 512 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 ZXDAP98168 799 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 KLHL30Q0D2K2 578 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 PTP4A2Q12974 167 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 BTBD8Q5XKL5 378 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 TMC6Q7Z403 805 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 XYLT1Q86Y38 959 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 TTC16Q8NEE8 873 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 DEPDC1BQ8WUY9 529 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 SYN2Q92777 582 aaPredicted RBP16.79■□□□□ 0.28
USP39-205ENST00000442708 E2F7Q96AV8 911 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 TRMT61BQ9BVS5 477 aaKnown RBP16.79■□□□□ 0.28
USP39-205ENST00000442708 KIF9Q9HAQ2 790 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 TAS2R14Q9NYV8 317 aa16.79■□□□□ 0.28
USP39-205ENST00000442708 ARNTLO00327 626 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 DDX3XO00571 662 aaKnown RBP eCLIP16.78■□□□□ 0.289e-13■■■■□ 21.9
USP39-205ENST00000442708 GREM1O60565 184 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 CCDC172P0C7W6 258 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 RALAP11233 206 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 MMP8P22894 467 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 GDI1P31150 447 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 ADKP55263 362 aaKnown RBP16.78■□□□□ 0.28
USP39-205ENST00000442708 CENPCQ03188 943 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 EFEMP1Q12805 493 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 TRIM14Q14142 442 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 ARID5BQ14865 1188 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 SYPL2Q5VXT5 272 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 OR6B2Q6IFH4 312 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 KLHDC10Q6PID8 442 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 WDR59Q6PJI9 974 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 TRIM72Q6ZMU5 477 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 MMS22LQ6ZRQ5 1243 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 ERICH1Q86X53 443 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 DNAAF5Q86Y56 855 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 MIB1Q86YT6 1006 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 ZNF397Q8NF99 534 aaPredicted RBP16.78■□□□□ 0.28
USP39-205ENST00000442708 FAM149B1Q96BN6 582 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 MRFAP1L1Q96HT8 127 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 NOX5Q96PH1 765 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 EPHX3Q9H6B9 360 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 ABCC13Q9NSE7 274 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 SEPT11Q9NVA2 429 aaKnown RBP16.78■□□□□ 0.28
USP39-205ENST00000442708 CFAP97Q9P2B7 532 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 SFMBT1Q9UHJ3 866 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 RASAL2Q9UJF2 1139 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 DNMT3LQ9UJW3 386 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 NAALADL1Q9UQQ1 740 aa16.78■□□□□ 0.28
USP39-205ENST00000442708 PI4K2BG5E9Z4 385 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 GRAP2O75791 330 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 IRF1P10914 325 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 TNFAIP3P21580 790 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 HNRNPH3P31942 346 aaKnown RBP16.77■□□□□ 0.28
USP39-205ENST00000442708 PITX1P78337 314 aaPredicted RBP16.77■□□□□ 0.28
USP39-205ENST00000442708 SLC6A3Q01959 620 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 MTF1Q14872 753 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 TRIM68Q6AZZ1 485 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 MSANTD2Q6P1R3 559 aa16.77■□□□□ 0.28
USP39-205ENST00000442708 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
USP39-205ENST00000442708 PHLDB2Q86SQ0 1253 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms