RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 C2orf42Q9NWW7 574 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 LSM7Q9UK45 103 aaKnown RBP11.74□□□□□ -0.53
NELFE-205ENST00000441998 STARD13Q9Y3M8 1113 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 PCDHGA5Q9Y5G8 931 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 FANCMQ8IYD8 2048 aa11.74□□□□□ -0.53
NELFE-205ENST00000441998 CACNA1AO00555 2505 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 XPO1O14980 1071 aaKnown RBP11.73□□□□□ -0.53
NELFE-205ENST00000441998 AXIN1O15169 862 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 RPP40O75818 363 aaKnown RBP11.73□□□□□ -0.53
NELFE-205ENST00000441998 BMP6P22004 513 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 CHKAP35790 457 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 BCAT1P54687 386 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 GCNT1Q02742 428 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 DMWDQ09019 674 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 DMC1Q14565 340 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 CSRP2Q16527 193 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 SGO2Q562F6 1265 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 LY6G5CQ5SRR4 150 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 PKN3Q6P5Z2 889 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 CEP68Q76N32 757 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 TICRRQ7Z2Z1 1910 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 RASSF3Q86WH2 238 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 KIAA2013Q8IYS2 634 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 DCLK2Q8N568 766 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 UBR7Q8N806 425 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 NELFBQ8WX92 580 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 KCTD13Q8WZ19 329 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 XPO6Q96QU8 1125 aaKnown RBP11.73□□□□□ -0.53
NELFE-205ENST00000441998 IRX2Q9BZI1 471 aaPredicted RBP11.73□□□□□ -0.53
NELFE-205ENST00000441998 DEC1Q9P2X7 70 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 HESX1Q9UBX0 185 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 MMP17Q9ULZ9 603 aa11.73□□□□□ -0.53
NELFE-205ENST00000441998 KIF26AQ9ULI4 1882 aaPredicted RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 A0A1W2PQH9 124 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 TRIM49BA6NDI0 452 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 CYP26A1O43174 497 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 ALDH1A2O94788 518 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 TBX18O95935 607 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 ZBED1O96006 694 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 SETSIPP0DME0 302 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 CCDC192P0DO97 292 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 CD44P16070 742 aaKnown RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 KIR2DL1P43626 348 aaPredicted RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 BST2Q10589 180 aaKnown RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 PAK1Q13153 545 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 CNGA2Q16280 664 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 CRY1Q16526 586 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 MEA1Q16626 185 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 CCDC40Q4G0X9 1142 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 ZNF394Q53GI3 561 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 USP39Q53GS9 565 aaKnown RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 SPDYCQ5MJ68 293 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 EOGTQ5NDL2 527 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 C10orf120Q5SQS8 335 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 LCLAT1Q6UWP7 414 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 Q6ZNB5 142 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 PRR23BQ6ZRT6 265 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 GPRIN1Q7Z2K8 1008 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 PIGZQ86VD9 579 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 TRIM59Q8IWR1 403 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 BBS7Q8IWZ6 715 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 PHTF2Q8N3S3 785 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 EHBP1Q8NDI1 1231 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 TSTD1Q8NFU3 115 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 LMO3Q8TAP4 145 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 ERCC4Q92889 916 aaPredicted RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 CNOT6LQ96LI5 555 aaKnown RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 NT5C1BQ96P26 610 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 ARID3AQ99856 593 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 NMUR1Q9HB89 426 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 ARHGEF4Q9NR80 690 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 OLA1Q9NTK5 396 aaKnown RBP11.72□□□□□ -0.53
NELFE-205ENST00000441998 OSER1Q9NX31 292 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 KIAA1468Q9P260 1216 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 NAGPAQ9UK23 515 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 CEP250Q9BV73 2442 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 PATJQ8NI35 1801 aa11.72□□□□□ -0.53
NELFE-205ENST00000441998 PTPRDP23468 1912 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 DENND4CQ5VZ89 1909 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 TBC1D3BA6NDS4 549 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 NPC1O15118 1278 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 CACNG3O60359 315 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 TULP3O75386 442 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 RHOBTB1O94844 696 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
NELFE-205ENST00000441998 SLC6A11P48066 632 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 PGFP49763 221 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 TKTL1P51854 596 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 ZNF445P59923 1031 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 PKDCCQ504Y2 493 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 NAIF1Q69YI7 327 aaPredicted RBP11.71□□□□□ -0.53
NELFE-205ENST00000441998 HEATR6Q6AI08 1181 aaKnown RBP11.71□□□□□ -0.53
NELFE-205ENST00000441998 ENOSF1Q7L5Y1 443 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.71□□□□□ -0.53
NELFE-205ENST00000441998 TTC30AQ86WT1 665 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 TMEM25Q86YD3 366 aa11.71□□□□□ -0.53
NELFE-205ENST00000441998 FAM160A2Q8N612 972 aaPredicted RBP11.71□□□□□ -0.53
NELFE-205ENST00000441998 RMDN1Q96DB5 314 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms