RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MARS2Q96GW9 593 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 DIRC2Q96SL1 478 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TCF25Q9BQ70 676 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 SPON1Q9HCB6 807 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 NFKBIL1Q9UBC1 381 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ADD3Q9UEY8 706 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 GIMAP2Q9UG22 337 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ACAD8Q9UKU7 415 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 CAMK2AQ9UQM7 478 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MAGED1Q9Y5V3 778 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 PIAS3Q9Y6X2 628 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 NACADO15069 1562 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 A0A1W2PRX2 142 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF503-AS2A6NEH8 195 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 CBFA2T3O75081 653 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 F9P00740 461 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 HK1P19367 917 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TNNT2P45379 298 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MCM2P49736 904 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 PGDP52209 483 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 SATB1Q01826 763 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 PIGFQ07326 219 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 CUL4AQ13619 759 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 EIF4A2Q14240 407 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 DOK3Q7L591 496 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TRABD2AQ86V40 505 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ANKRD13BQ86YJ7 626 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 KLHL36Q8N4N3 616 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MBD3L2Q8NHZ7 208 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 RBM17Q96I25 401 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 CDHR1Q96JP9 859 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF512Q96ME7 567 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 TTC14Q96N46 770 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZMAT2Q96NC0 199 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ASB2Q96Q27 587 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 HIST1H2AAQ96QV6 131 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 NUDT22Q9BRQ3 303 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 PHF7Q9BWX1 381 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 KRTAP4-8Q9BYQ9 185 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 LIN7CQ9NUP9 197 aaKnown RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 MRGBPQ9NV56 204 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 ODF2LQ9ULJ1 636 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 RCE1Q9Y256 329 aa4.5□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC38A8A6NNN8 435 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 PES1O00541 588 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 CSF1RP07333 972 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 OAS2P29728 719 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 HTR7P34969 479 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 MLH1P40692 756 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 RGS2P41220 211 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 CHN2P52757 468 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 RPP30P78346 268 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ADAM17P78536 824 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 IFT88Q13099 833 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 NFIXQ14938 502 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 NRN1LQ496H8 165 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 UBXN11Q5T124 520 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 FAM69AQ5T7M9 428 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 EFCAB12Q6NXP0 572 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 LRRC8DQ7L1W4 858 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 RALYLQ86SE5 291 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 NKAIN3Q8N8D7 197 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 SHCBP1Q8NEM2 672 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 POC1BQ8TC44 478 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ITFG2Q969R8 447 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZDHHC12Q96GR4 267 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZNF668Q96K58 619 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ITPAQ9BY32 194 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ARHGAP39Q9C0H5 1083 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 ZDHHC7Q9NXF8 308 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 POGKQ9P215 609 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 NDRG4Q9ULP0 352 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 TMCC3Q9ULS5 477 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 USP22Q9UPT9 525 aa4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 CENPJQ9HC77 1338 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-207ENST00000441725 TSPY2A6NKD2 308 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 AP3D1O14617 1153 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 HEXIM1O94992 359 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 STARD3NLO95772 234 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SCGB1D1O95968 90 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TSPY3P0CV98 308 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TSPY8P0CW00 308 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 ACADMP11310 421 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CDK7P50613 346 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TSPY1Q01534 308 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 MC2RQ01718 297 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 P3H1Q32P28 736 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PIK3AP1Q6ZUJ8 805 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 PXKQ7Z7A4 578 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 CPLX4Q7Z7G2 160 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 DIS3L2Q8IYB7 885 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 GPR135Q8IZ08 494 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 FAM71DQ8N9W8 422 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 TXNDC5Q8NBS9 432 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SUN3Q8TAQ9 357 aa4.48□□□□□ -1.69
CDC42BPA-207ENST00000441725 SLC22A17Q8WUG5 538 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms