RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 TIMMDC1Q9NPL8 285 aa12.36□□□□□ -0.43
LTBR-203ENST00000441074 C1orf112Q9NSG2 853 aa12.36□□□□□ -0.43
LTBR-203ENST00000441074 RBPJLQ9UBG7 517 aa12.36□□□□□ -0.43
LTBR-203ENST00000441074 SORCS3Q9UPU3 1222 aa12.36□□□□□ -0.43
LTBR-203ENST00000441074 TLL2Q9Y6L7 1015 aa12.36□□□□□ -0.43
LTBR-203ENST00000441074 SCINQ9Y6U3 715 aa12.36□□□□□ -0.43
LTBR-203ENST00000441074 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 CASQ2O14958 399 aaPredicted RBP12.35□□□□□ -0.43
LTBR-203ENST00000441074 ATP6V1G1O75348 118 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 IFNB1P01574 187 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 KRT1P04264 644 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 SERPINA6P08185 405 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 AOC1P19801 751 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 CCND2P30279 289 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 PTPN7P35236 360 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 CLCN2P51788 898 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 JAK3P52333 1124 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 OAZ1P54368 228 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 PSMC5P62195 406 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 GAD2Q05329 585 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 CYP24A1Q07973 514 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 GRM1Q13255 1194 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 HSP90AA5PQ58FG0 334 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 ANKRD22Q5VYY1 191 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 OLFML2BQ68BL8 750 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 SPOCD1Q6ZMY3 1216 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 ARID3BQ8IVW6 561 aaPredicted RBP12.35□□□□□ -0.43
LTBR-203ENST00000441074 NAT8LQ8N9F0 302 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 TMEM161BQ8NDZ6 487 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 SLC44A1Q8WWI5 657 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 CPT1BQ92523 772 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 TMEM121Q9BTD3 319 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 USP29Q9HBJ7 922 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 CREBZFQ9NS37 354 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 KLHL11Q9NVR0 708 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 RLFQ13129 1914 aa12.35□□□□□ -0.43
LTBR-203ENST00000441074 C15orf38-AP3S2A0A0A6YYH1 394 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ARHGAP42A6NI28 874 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 PRR5-ARHGAP8B1AHC4 643 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 TLR3O15455 904 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 PGM3O95394 542 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 TFAP2AP05549 437 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 PEX2P28328 305 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SFNP31947 248 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ZNF157P51786 506 aaPredicted RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 ADARP55265 1226 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 ARHGAP8P85298 464 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 PLCB3Q01970 1234 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 BST1Q10588 318 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 LRRC38Q5VT99 294 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 GPAT2Q6NUI2 795 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 KLHDC10Q6PID8 442 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 C1orf228Q6PIY5 440 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ARPINQ7Z6K5 226 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 MARVELD2Q8N4S9 558 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SAMD3Q8N6K7 520 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 DNAJC1Q96KC8 554 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 ACAP3Q96P50 834 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 C11orf70Q9BRQ4 267 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 IP6K2Q9UHH9 426 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 TCEAL9Q9UHQ7 104 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 IKBKGQ9Y6K9 419 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 PHIPQ8WWQ0 1821 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 hCG_2014768A0A024R1R8 64 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SOWAHBA6NEL2 793 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 COPEO14579 308 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 DENRO43583 198 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 FAM155BO75949 473 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 CLPTM1O96005 669 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 KCNA2P16389 499 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ABCD1P33897 745 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ALDH18A1P54886 795 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 AQP5P55064 265 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 TMPRSS15P98073 1019 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 FOLH1Q04609 750 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 CCNIQ14094 377 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ZFYVE27Q5T4F4 411 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 FAM102BQ5T8I3 360 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SV2AQ7L0J3 742 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 ICA1LQ8NDH6 482 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SLC35B2Q8TB61 432 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 FEZF2Q8TBJ5 459 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SLC26A7Q8TE54 656 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 SRPK1Q96SB4 655 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 SENP7Q9BQF6 1050 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 IQCGQ9H095 443 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 PORCNQ9H237 461 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 MAP3K20Q9NYL2 800 aaKnown RBP12.34□□□□□ -0.43
LTBR-203ENST00000441074 PLK2Q9NYY3 685 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 GABBR1Q9UBS5 961 aa12.34□□□□□ -0.43
LTBR-203ENST00000441074 hCG_1818297A0A087WSY0 165 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 TXNDC9O14530 226 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 INHBAP08476 426 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 CDK4P11802 303 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 GARTP22102 1010 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 NPTX2P47972 431 aa12.33□□□□□ -0.44
LTBR-203ENST00000441074 ZNF200P98182 395 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms