RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 PGFP49763 221 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 SLC25A52Q3SY17 297 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 TMEM240Q5SV17 173 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 KCTD6Q8NC69 237 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 FBXO22Q8NEZ5 403 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 NPY6RQ99463 290 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 SEPT5Q99719 369 aaPredicted RBP19.92■□□□□ 0.78
SNX17-203ENST00000440760 TRIM51Q9BSJ1 452 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 CALN1Q9BXU9 219 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 MAGEB5Q9BZ81 275 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 SLITRK6Q9H5Y7 841 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 MTRRQ9UBK8 725 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 USP3Q9Y6I4 520 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 COL4A4P53420 1690 aaPredicted RBP19.92■□□□□ 0.78
SNX17-203ENST00000440760 ZNF638Q14966 1978 aaKnown RBP19.92■□□□□ 0.78
SNX17-203ENST00000440760 PLXNA3P51805 1871 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 WDR27A2RRH5 827 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 SEC31AO94979 1220 aaKnown RBP19.92■□□□□ 0.78
SNX17-203ENST00000440760 NCAM1P13591 858 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 KCNJ1P48048 391 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 CDH6P55285 790 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 DYNLT1P63172 113 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 ROR1Q01973 937 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 GUCY2DQ02846 1103 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 MMRN1Q13201 1228 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 NME3Q13232 169 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 GPR17Q13304 367 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 TRADDQ15628 312 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 TFDP3Q5H9I0 405 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 PM20D1Q6GTS8 502 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 KIAA1841Q6NSI8 718 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 SLC7A14Q8TBB6 771 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 AUTS2Q8WXX7 1259 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 TMPRSS4Q9NRS4 437 aa19.92■□□□□ 0.78
SNX17-203ENST00000440760 M0QYT0 321 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 GJB5O95377 273 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 SOD2P04179 222 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 USP46P62068 366 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 CYP1B1Q16678 543 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 MGAT5BQ3V5L5 792 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 GLE1Q53GS7 698 aaKnown RBP19.91■□□□□ 0.78
SNX17-203ENST00000440760 WDR93Q6P2C0 686 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 VSTM1Q6UX27 236 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 CMASQ8NFW8 434 aaPredicted RBP19.91■□□□□ 0.78
SNX17-203ENST00000440760 PIK3R5Q8WYR1 880 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 STAP1Q9ULZ2 295 aa19.91■□□□□ 0.78
SNX17-203ENST00000440760 GREB1Q4ZG55 1949 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 DNAJB2P25686 324 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 OR1D2P34982 312 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 CETN2P41208 172 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 COPS2P61201 443 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 DUSP4Q13115 394 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 BSPRYQ5W0U4 402 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 CCDC137Q6PK04 289 aaKnown RBP19.9■□□□□ 0.78
SNX17-203ENST00000440760 STRADAQ7RTN6 431 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 NT5C3BQ969T7 300 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 EPB41L5Q9HCM4 733 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 PIGVQ9NUD9 493 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 TRIM66O15016 1216 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 CHRNA3P32297 505 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 PTPN7P35236 360 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 COILP38432 576 aaPredicted RBP19.9■□□□□ 0.78
SNX17-203ENST00000440760 MAGEA11P43364 429 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 DR1Q01658 176 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 DPYSL3Q14195 570 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 PPP2R5EQ16537 467 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 C12orf50Q8NA57 414 aaPredicted RBP19.9■□□□□ 0.78
SNX17-203ENST00000440760 IRGQQ8WZA9 623 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 C8orf48Q96LL4 319 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 ZBED2Q9BTP6 218 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 DCLK3Q9C098 648 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 ARGLU1Q9NWB6 273 aaPredicted RBP19.9■□□□□ 0.78
SNX17-203ENST00000440760 SPG21Q9NZD8 308 aa19.9■□□□□ 0.78
SNX17-203ENST00000440760 PLXNA4Q9HCM2 1894 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 GLUD2P49448 558 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 ARSEP51690 589 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 KRT81Q14533 505 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 SLC8B1Q6J4K2 584 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 BNIPLQ7Z465 357 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 SPPL2BQ8TCT7 592 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 HERC2P3Q9BVR0 1158 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 NMUR1Q9HB89 426 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 SAE1Q9UBE0 346 aaPredicted RBP19.89■□□□□ 0.77
SNX17-203ENST00000440760 AP4E1Q9UPM8 1137 aa19.89■□□□□ 0.77
SNX17-203ENST00000440760 CCDC151A5D8V7 595 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 LINC00271P0C7V0 271 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 RDXP35241 583 aaKnown RBP19.88■□□□□ 0.77
SNX17-203ENST00000440760 PTGIRP43119 386 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 YWHAGP61981 247 aaKnown RBP eCLIP19.88■□□□□ 0.77
SNX17-203ENST00000440760 HTRA4P83105 476 aaPredicted RBP19.88■□□□□ 0.77
SNX17-203ENST00000440760 DEUP1Q05D60 604 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 MTMR3Q13615 1198 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 TAZQ16635 292 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 PPP6R3Q5H9R7 873 aaPredicted RBP19.88■□□□□ 0.77
SNX17-203ENST00000440760 PSRC1Q6PGN9 363 aaPredicted RBP19.88■□□□□ 0.77
SNX17-203ENST00000440760 SCD5Q86SK9 330 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 JAMLQ86YT9 394 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 RFX6Q8HWS3 928 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 CCDC105Q8IYK2 499 aa19.88■□□□□ 0.77
SNX17-203ENST00000440760 NUP93Q8N1F7 819 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms