RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 PLXNA4Q9HCM2 1894 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 CHD9Q3L8U1 2897 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 RANBP2P49792 3224 aaKnown RBP29.18■■■□□ 2.26
CGREF1-207ENST00000440612 PI4K2BG5E9Z4 385 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 TEX28O15482 410 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 KRT7P08729 469 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 SIX1Q15475 284 aaPredicted RBP29.18■■■□□ 2.26
CGREF1-207ENST00000440612 GOLGA1Q92805 767 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 SLITRK1Q96PX8 696 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 C17orf80Q9BSJ5 609 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 NMUR1Q9HB89 426 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 DDX56Q9NY93 547 aaKnown RBP29.18■■■□□ 2.26
CGREF1-207ENST00000440612 HSFX1Q9UBD0 423 aa29.18■■■□□ 2.26
CGREF1-207ENST00000440612 SULT1E1P49888 294 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 IFRD2Q12894 506 aaPredicted RBP29.17■■■□□ 2.26
CGREF1-207ENST00000440612 LONRF2Q1L5Z9 754 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 MFSD7Q6UXD7 560 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 RCOR2Q8IZ40 523 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 MMGT1Q8N4V1 131 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 EDEM1Q92611 657 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 RNF25Q96BH1 459 aaPredicted RBP29.17■■■□□ 2.26
CGREF1-207ENST00000440612 AP1M1Q9BXS5 423 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.17■■■□□ 2.26
CGREF1-207ENST00000440612 NR2E3Q9Y5X4 410 aa29.17■■■□□ 2.26
CGREF1-207ENST00000440612 PLXNA3P51805 1871 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 FSCN2O14926 492 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 KRT1P04264 644 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 NCAM1P13591 858 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 CTNNB1P35222 781 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 ARSEP51690 589 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 MTMR3Q13615 1198 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 LLGL1Q15334 1064 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 TAZQ16635 292 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 DENND5BQ6ZUT9 1274 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 ALG13Q9NP73 1137 aaKnown RBP29.16■■■□□ 2.26
CGREF1-207ENST00000440612 OSER1Q9NX31 292 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 LZTS1Q9Y250 596 aa29.16■■■□□ 2.26
CGREF1-207ENST00000440612 DNAJB1P25685 340 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 YWHAGP61981 247 aaKnown RBP eCLIP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 RPL10AP62906 217 aaKnown RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 KLF1Q13351 362 aaPredicted RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 PGAP3Q96FM1 320 aaPredicted RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 NCAPGQ9BPX3 1015 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 PLVAPQ9BX97 442 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 FBXO44Q9H4M3 255 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 STAP1Q9ULZ2 295 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 CHD7Q9P2D1 2997 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 C5orf67F2Z3F1 127 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 KRIT1O00522 736 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 PRPSAP2O60256 369 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 CNPP09543 421 aaKnown RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 RALAP11233 206 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 CDKN2BP42772 138 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 TUFMP49411 452 aaKnown RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 ERVFC1P60507 584 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 ADCY2Q08462 1091 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 TEX35Q5T0J7 233 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 ADAT2Q7Z6V5 191 aaKnown RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 SPPL3Q8TCT6 385 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 RBM41Q96IZ5 413 aaKnown RBP29.15■■■□□ 2.26
CGREF1-207ENST00000440612 CEP295NLQ96MC4 621 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 EPC1Q9H2F5 836 aa29.15■■■□□ 2.26
CGREF1-207ENST00000440612 CEP290O15078 2479 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 M0QYT0 321 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 CAPN9O14815 690 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 CD48P09326 243 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 PTPN7P35236 360 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 EIF4EBP2Q13542 120 aaPredicted RBP29.14■■■□□ 2.26
CGREF1-207ENST00000440612 BOLA3Q53S33 107 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 SCYL2Q6P3W7 929 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 SPOCD1Q6ZMY3 1216 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 TEKT4Q8WW24 435 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 UBXN4Q92575 508 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 NAP1L3Q99457 506 aaPredicted RBP29.14■■■□□ 2.26
CGREF1-207ENST00000440612 TTLL2Q9BWV7 592 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 OSBPL8Q9BZF1 889 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 WDR6Q9NNW5 1121 aaKnown RBP29.14■■■□□ 2.26
CGREF1-207ENST00000440612 PIGVQ9NUD9 493 aa29.14■■■□□ 2.26
CGREF1-207ENST00000440612 GREB1Q4ZG55 1949 aa29.14■■■□□ 2.25
CGREF1-207ENST00000440612 A0A1W2PQH9 124 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 IGLV3-25P01717 112 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 KDELR1P24390 212 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 CLUL1Q15846 466 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 MON1AQ86VX9 555 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 CCDC185Q8N715 623 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 PRELID2Q8N945 189 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 ADAM32Q8TC27 787 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 GIPC2Q8TF65 315 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 SNRNP25Q9BV90 132 aaKnown RBP29.13■■■□□ 2.25
CGREF1-207ENST00000440612 ABCC13Q9NSE7 274 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 COMMD8Q9NX08 183 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 IRAK3Q9Y616 596 aa29.13■■■□□ 2.25
CGREF1-207ENST00000440612 LRRD1A4D1F6 860 aa29.12■■■□□ 2.25
CGREF1-207ENST00000440612 SLC38A8A6NNN8 435 aa29.12■■■□□ 2.25
CGREF1-207ENST00000440612 RTN3O95197 1032 aaPredicted RBP29.12■■■□□ 2.25
CGREF1-207ENST00000440612 YWHAQP27348 245 aa29.12■■■□□ 2.25
CGREF1-207ENST00000440612 RDXP35241 583 aaKnown RBP29.12■■■□□ 2.25
CGREF1-207ENST00000440612 COPS2P61201 443 aa29.12■■■□□ 2.25
CGREF1-207ENST00000440612 CA9Q16790 459 aa29.12■■■□□ 2.25
CGREF1-207ENST00000440612 CCDC50Q8IVM0 306 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms