RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 MMP8P22894 467 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 NAMPTP43490 491 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 PPP2R5DQ14738 602 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 HSDL1Q3SXM5 330 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 RAB6CQ53S08 254 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 EEF1DP3Q658K8 133 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 SYDE1Q6ZW31 735 aaPredicted RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 ZCCHC9Q8N567 271 aaKnown RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 CPB2Q96IY4 423 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 PLEKHG4BQ96PX9 1271 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 PAFAH2Q99487 392 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 RAB6CQ9H0N0 254 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 RAB6BQ9NRW1 208 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 PPM1HQ9ULR3 514 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 SYNPO2Q9UMS6 1093 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 DOLKQ9UPQ8 538 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 C2CD2LO14523 706 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 RNASEH1O60930 286 aaKnown RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 FAM155BO75949 473 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 SLC25A3Q00325 362 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 CDC16Q13042 620 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 PTPN20Q4JDL3 420 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 MSS51Q4VC12 460 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 FNBP1LQ5T0N5 605 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 TRIM72Q6ZMU5 477 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 SULF1Q8IWU6 871 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 TEPSINQ96N21 525 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 TRIM56Q9BRZ2 755 aaKnown RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 TMEM191CA6NGB0 347 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 SPDYE16A6NNV3 312 aaPredicted RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 COPEO14579 308 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 VCPP55072 806 aaKnown RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 BMPR2Q13873 1038 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 CNGA3Q16281 694 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 TMEM63BQ5T3F8 832 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 MFSD4BQ5TF39 518 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 LRRC8BQ6P9F7 803 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 R3HDMLQ9H3Y0 253 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 RPF1Q9H9Y2 349 aaKnown RBP12.89□□□□□ -0.35
PCGF3-207ENST00000440452 KRT82Q9NSB4 513 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 HMGXB4Q9UGU5 601 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 AFG3L2Q9Y4W6 797 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 AK5Q9Y6K8 562 aa12.89□□□□□ -0.35
PCGF3-207ENST00000440452 A0A0B4J269 797 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 HNRNPCL1O60812 293 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 IL1R2P27930 398 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 KLF1Q13351 362 aaPredicted RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 PLEKHA7Q6IQ23 1121 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 RAPH1Q70E73 1250 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 FBXO16Q8IX29 292 aaPredicted RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 RBM15BQ8NDT2 890 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 OR6Y1Q8NGX8 325 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 OXNAD1Q96HP4 312 aaPredicted RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 SPATA33Q96N06 139 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 KLHL4Q9C0H6 718 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 SAR1AQ9NR31 198 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 MYOCOSA0A1B0GUC4 107 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 KCNN4O15554 427 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 NELFEP18615 380 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 TGFB2P61812 414 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 C1QBPQ07021 282 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 ZNF252P-AS1Q0IIN9 211 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 LAMTOR4Q0VGL1 99 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 MAP7D1Q3KQU3 841 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 TREML2Q5T2D2 321 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 GDPD5Q8WTR4 605 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 PPP1R36Q96LQ0 422 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 CPXM1Q96SM3 734 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 PRPF18Q99633 342 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 MRPL1Q9BYD6 325 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 HOXC10Q9NYD6 342 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 TMCO1Q9UM00 188 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 hCG_1818297A0A087WSY0 165 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 CCR3P51677 355 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 AQP5P55064 265 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 CBX3Q13185 183 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 PLEKHG4Q58EX7 1191 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 FAM160B1Q5W0V3 765 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 ALLCQ8N6M5 410 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 C12orf29Q8N999 325 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 CEP41Q9BYV8 373 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 BTBD7Q9P203 1132 aa12.88□□□□□ -0.35
PCGF3-207ENST00000440452 MTO1Q9Y2Z2 717 aaKnown RBP12.88□□□□□ -0.35
PCGF3-207ENST00000440452 ATP8B3O60423 1300 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 MAFGO15525 162 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 PEX1O43933 1283 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 IMPDH2P12268 514 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 PDGFRAP16234 1089 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 RPL22P35268 128 aaKnown RBP12.87□□□□□ -0.35
PCGF3-207ENST00000440452 ELK3P41970 407 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 CDK16Q00536 496 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 ZCCHC23Q6ZST2 131 aa12.87□□□□□ -0.35
PCGF3-207ENST00000440452 TTC25Q96NG3 672 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms