RNA–Protein interactions for RNA: ENST00000440437.1

COL16A1-204, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-204ENST00000440437 ARHGEF4Q9NR80 690 aa17.73■□□□□ 0.43
COL16A1-204ENST00000440437 CISHQ9NSE2 258 aa17.73■□□□□ 0.43
COL16A1-204ENST00000440437 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.73■□□□□ 0.43
COL16A1-204ENST00000440437 COQ4Q9Y3A0 265 aa17.73■□□□□ 0.43
COL16A1-204ENST00000440437 USP3Q9Y6I4 520 aa17.73■□□□□ 0.43
COL16A1-204ENST00000440437 SDK1Q7Z5N4 2213 aa17.73■□□□□ 0.43
COL16A1-204ENST00000440437 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 A0A1W2PQH9 124 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 TRIM49BA6NDI0 452 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 GOLGA6L4A6NEF3 574 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 GDF9O60383 454 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 FOXD2O60548 495 aaPredicted RBP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 HNRNPLP14866 589 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 ATP5C1P36542 298 aaKnown RBP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 GRIA2P42262 883 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 DGKEP52429 567 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 RAD23BP54727 409 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 FKBP3Q00688 224 aaKnown RBP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 CRY1Q16526 586 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 HSF5Q4G112 596 aaPredicted RBP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 PLA2G2CQ5R387 149 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 ANKRD40Q6AI12 368 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 KLHDC10Q6PID8 442 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 TMEM92Q6UXU6 159 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 CCDC186Q7Z3E2 898 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 TTC39CQ8N584 583 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 CCDC33Q8N5R6 958 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 ALLCQ8N6M5 410 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 TATDN2Q93075 761 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 SMARCE1Q969G3 411 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
COL16A1-204ENST00000440437 TSG101Q99816 390 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 PCDHGA5Q9Y5G8 931 aa17.72■□□□□ 0.43
COL16A1-204ENST00000440437 SLC30A4O14863 429 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 DCLK1O15075 740 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TULP3O75386 442 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 SMC2O95347 1197 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 ZNF806P0C7X5 589 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 RARGP13631 454 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TIE1P35590 1138 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TNFRSF4P43489 277 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 LRRC63Q05C16 580 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
COL16A1-204ENST00000440437 EMC10Q5UCC4 262 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TCERG1LQ5VWI1 586 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 ARHGAP17Q68EM7 881 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 SCD5Q86SK9 330 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TMEM25Q86YD3 366 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 ZNF276Q8N554 614 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TXNDC5Q8NBS9 432 aaKnown RBP17.71■□□□□ 0.43
COL16A1-204ENST00000440437 MDGA1Q8NFP4 955 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TMEM176AQ96HP8 235 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 TPSD1Q9BZJ3 242 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 DNAI2Q9GZS0 605 aa17.71■□□□□ 0.43
COL16A1-204ENST00000440437 ABCA7Q8IZY2 2146 aa17.71■□□□□ 0.42
COL16A1-204ENST00000440437 SGK1O00141 431 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 MDM4O15151 490 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 KLF8O95600 359 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-204ENST00000440437 PSEN1P49768 467 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 SF3A2Q15428 464 aaKnown RBP17.7■□□□□ 0.42
COL16A1-204ENST00000440437 CCDC6Q16204 474 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 BTBD8Q5XKL5 378 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 ANO7Q6IWH7 933 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 Q6ZNB5 142 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 ELOA2Q8IYF1 753 aaPredicted RBP17.7■□□□□ 0.42
COL16A1-204ENST00000440437 NAT16Q8N8M0 369 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 TERB1Q8NA31 727 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 SLC35C1Q96A29 364 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 HEXIM2Q96MH2 286 aaKnown RBP17.7■□□□□ 0.42
COL16A1-204ENST00000440437 GTPBP4Q9BZE4 634 aaKnown RBP17.7■□□□□ 0.42
COL16A1-204ENST00000440437 MARK1Q9P0L2 795 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 NUDT5Q9UKK9 219 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 CEP192Q8TEP8 1941 aa17.7■□□□□ 0.42
COL16A1-204ENST00000440437 DCDC2BA2VCK2 349 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 ADAM23O75077 832 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 MPLP40238 635 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 GOLGA8FQ08AF8 430 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 GOLGA8DPQ0D2H9 430 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 ELF2Q15723 593 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 ANO4Q32M45 955 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 RAB41Q5JT25 222 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 OLIG1Q8TAK6 271 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 UBXN6Q9BZV1 441 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 ZDHHC4Q9NPG8 344 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 CLIC5Q9NZA1 410 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 DEC1Q9P2X7 70 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 DNMT3LQ9UJW3 386 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 NAGPAQ9UK23 515 aa17.69■□□□□ 0.42
COL16A1-204ENST00000440437 LSM7Q9UK45 103 aaKnown RBP17.69■□□□□ 0.42
COL16A1-204ENST00000440437 TRIM24O15164 1050 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 CACNG3O60359 315 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 STC2O76061 302 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 RHOBTB1O94844 696 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 CD44P16070 742 aaKnown RBP17.68■□□□□ 0.42
COL16A1-204ENST00000440437 LAMA1P25391 3075 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 PLA2G4AP47712 749 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 LIMK1P53667 647 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 CUL2Q13617 745 aa17.68■□□□□ 0.42
COL16A1-204ENST00000440437 PREPLQ4J6C6 727 aaPredicted RBP17.68■□□□□ 0.42
COL16A1-204ENST00000440437 AASDHQ4L235 1098 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms