RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 M0QYV0 167 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MYO1FO00160 1098 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 XYLBO75191 536 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 FAM163BP0C2L3 166 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CCDC130P13994 396 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MMP8P22894 467 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 BDNFP23560 247 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SLC1A1P43005 524 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CACNA2D1P54289 1103 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RNASE9P60153 205 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 ZP2Q05996 745 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 NFE2Q16621 373 aaPredicted RBP15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 PHLDB2Q86SQ0 1253 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RASGEF1CQ8N431 466 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 C12orf29Q8N999 325 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MYCBPAPQ8TBZ2 947 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SPPL2BQ8TCT7 592 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 GIPC2Q8TF65 315 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 BTBD6Q96KE9 485 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CORO1BQ9BR76 489 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 B3GNT5Q9BYG0 378 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 LHX5Q9H2C1 402 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 SYNCQ9H7C4 482 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 WDR6Q9NNW5 1121 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RBM12Q9NTZ6 932 aaKnown RBP15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 FAM49BQ9NUQ9 324 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 TMEM30AQ9NV96 361 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 RAB21Q9UL25 225 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 MAFFQ9ULX9 164 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 FAM50BQ9Y247 325 aa15.27■□□□□ 0.04
TNFRSF1A-204ENST00000440083 CCDC188H7C350 402 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MICAL2O94851 1124 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 POU2F2P09086 479 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CTNNA1P35221 906 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PTP4A2Q12974 167 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 DDR2Q16832 855 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SLC5A9Q2M3M2 681 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAP9Q49MG5 647 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GLE1Q53GS7 698 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PLEKHA7Q6IQ23 1121 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GET4Q7L5D6 327 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SCN4BQ8IWT1 228 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ITFG1Q8TB96 612 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 IPO4Q8TEX9 1081 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C2orf15Q8WU43 125 aaKnown RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ING5Q8WYH8 240 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TCEAL4Q96EI5 215 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 NECTIN4Q96NY8 510 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PNKPQ96T60 521 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PHF7Q9BWX1 381 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ZNF334Q9HCZ1 680 aaPredicted RBP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ARFGAP3Q9NP61 516 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CD320Q9NPF0 282 aa15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.26■□□□□ 0.03
TNFRSF1A-204ENST00000440083 DOCK8Q8NF50 2099 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C2CD4DB7Z1M9 353 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 KRIT1O00522 736 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PROSCO94903 275 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 RHOP08100 348 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 FSHRP23945 695 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CCR2P41597 374 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ALDH1A3P47895 512 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 EPHB3P54753 998 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 RWDD2BP57060 319 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SMARCB1Q12824 385 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAMLD1Q13495 774 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MTMR3Q13615 1198 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GOLGA7BQ2TAP0 167 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PABPC1LQ4VXU2 614 aaKnown RBP15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C2CD6Q53TS8 623 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 WDR93Q6P2C0 686 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 DCUN1D2Q6PH85 259 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 C4orf50Q6ZRC1 276 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 PAQR9Q6ZVX9 377 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 RTL10Q7L3V2 364 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 UNC93AQ86WB7 457 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ADHFE1Q8IWW8 467 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ST13P5Q8NFI4 369 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SLC2A14Q8TDB8 520 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MYADMQ96S97 322 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 UHRF1Q96T88 793 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MED10Q9BTT4 135 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MIS12Q9H081 205 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 IP6K2Q9UHH9 426 aa15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TTC7AQ9ULT0 858 aaPredicted RBP15.25■□□□□ 0.03
TNFRSF1A-204ENST00000440083 O00370 1275 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 FGGP02679 453 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MYL4P12829 197 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 GJA1P17302 382 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 CEBPBP17676 345 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 ADORA2BP29275 332 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 MAN1A1P33908 653 aa15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 SSR1P43307 286 aaKnown RBP15.24■□□□□ 0.03
TNFRSF1A-204ENST00000440083 TUFMP49411 452 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms