RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 DDX1Q92499 740 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 KCNK4Q9NYG8 393 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 DKK3Q9UBP4 350 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CCNL1Q9UK58 526 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 TBX20Q9UMR3 447 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 F8W8V4 182 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 NDC80O14777 642 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 SEC24DO94855 1032 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CD48P09326 243 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 ALDH1A3P47895 512 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 RARRES1P49788 294 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 GABPAQ06546 454 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 CIAPIN1Q6FI81 312 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 TMEM214Q6NUQ4 689 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 DUS1LQ6P1R4 473 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 KLC3Q6P597 504 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 AMIGO2Q86SJ2 522 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 PDSS2Q86YH6 399 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 FAM172AQ8WUF8 416 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 EIF2AQ9BY44 585 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 XAB2Q9HCS7 855 aaKnown RBP12.12□□□□□ -0.47
SMPD4-209ENST00000439886 ITGB1BP2Q9UKP3 347 aa12.12□□□□□ -0.47
SMPD4-209ENST00000439886 UNGP13051 313 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-209ENST00000439886 CRABP2P29373 138 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 TM4SF1P30408 202 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 GK3PQ14409 553 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 ANKRD20A4Q4UJ75 823 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 SLC9A9Q8IVB4 645 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 KCNH7Q9NS40 1196 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 ATAD3AQ9NVI7 634 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 TXNDC16Q9P2K2 825 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 PLA2G4CQ9UP65 541 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 FIS1Q9Y3D6 152 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 IGLV3-22A0A075B6J6 115 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 A0A0J9YVX5 310 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 ARHGAP10A1A4S6 786 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 LRRIQ4A6NIV6 560 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 H3BSA7 217 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 KRT19P08727 400 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 FGFR3P22607 806 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 ADSSP30520 456 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 RPL5P46777 297 aaKnown RBP12.11□□□□□ -0.47
SMPD4-209ENST00000439886 NPTX2P47972 431 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 NUDT2P50583 147 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 OSTNP61366 133 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 HADHQ16836 314 aaKnown RBP12.11□□□□□ -0.47
SMPD4-209ENST00000439886 TTC39BQ5VTQ0 682 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-209ENST00000439886 KRT80Q6KB66 452 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 ZSCAN18Q8TBC5 510 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-209ENST00000439886 SEMA6AQ9H2E6 1030 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 PNPOQ9NVS9 261 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 STRIP2Q9ULQ0 834 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 UBE4BO95155 1302 aa12.11□□□□□ -0.47
SMPD4-209ENST00000439886 KCNN4O15554 427 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 GRAP2O75791 330 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 GMPRP36959 345 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 HALP42357 657 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 RAP1GDS1P52306 607 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 HPCAP84074 193 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 SLC15A2Q16348 729 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 FASTKD1Q53R41 847 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 MAP3K21Q5TCX8 1036 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 WDR78Q5VTH9 848 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 ZBTB33Q86T24 672 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 SSX2IPQ9Y2D8 614 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 DCCP43146 1447 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 CXorf49A8MYA2 514 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 VARSP26640 1264 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 GSTM4Q03013 218 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 TRAPPC3LQ5T215 181 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 SLC26A11Q86WA9 606 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 GPD1LQ8N335 351 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 ACER1Q8TDN7 264 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 PPWD1Q96BP3 646 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 ZNF668Q96K58 619 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 SNX27Q96L92 541 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 MBOAT7Q96N66 472 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 CIDEBQ9UHD4 219 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 HERC5Q9UII4 1024 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 TRPM3Q9HCF6 1732 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 hCG_1818297A0A087WSY0 165 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 A0A0B4J269 797 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 PABPC4LP0CB38 370 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 ENDOUP21128 410 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 SERPINB8P50452 374 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 GPC3P51654 580 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 MAPK10P53779 464 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 CYP24A1Q07973 514 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 MMRN1Q13201 1228 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 DCTN2Q13561 401 aaKnown RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 CLPPQ16740 277 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-209ENST00000439886 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
SMPD4-209ENST00000439886 UBE2Q1Q7Z7E8 422 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms