RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 USP3Q9Y6I4 520 aa17.16■□□□□ 0.34
SNRPD3-204ENST00000439775 TBX18O95935 607 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 IRF1P10914 325 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 TNFRSF4P43489 277 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 DGKEP52429 567 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 ATXN1P54253 815 aaKnown RBP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 RAD23BP54727 409 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 CRY1Q16526 586 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 PREPLQ4J6C6 727 aaPredicted RBP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 TCERG1LQ5VWI1 586 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 BTBD8Q5XKL5 378 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 TADA2BQ86TJ2 420 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 RASSF3Q86WH2 238 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 SLC4A11Q8NBS3 891 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 ERCC4Q92889 916 aaPredicted RBP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 WBP2Q969T9 261 aa17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 CNOT6LQ96LI5 555 aaKnown RBP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 HEXIM2Q96MH2 286 aaKnown RBP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 ARMCX3Q9UH62 379 aaPredicted RBP17.15■□□□□ 0.34
SNRPD3-204ENST00000439775 A0A1W2PQH9 124 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 TRIM49BA6NDI0 452 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 PSMA7O14818 248 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 PPP1R2P41236 205 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 KIR2DL1P43626 348 aaPredicted RBP17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 KDSRQ06136 332 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 STIM1Q13586 685 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 PLK5Q496M5 336 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 ARHGAP17Q68EM7 881 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 C11orf74Q86VG3 221 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 SFTPA1Q8IWL2 248 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 IL17RCQ8NAC3 791 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 SLC35C1Q96A29 364 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 CDK5RAP1Q96SZ6 601 aaKnown RBP17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 NMUR1Q9HB89 426 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 CLIC5Q9NZA1 410 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 DNMT3LQ9UJW3 386 aa17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 LSM7Q9UK45 103 aaKnown RBP17.14■□□□□ 0.33
SNRPD3-204ENST00000439775 MED19A0JLT2 244 aaPredicted RBP17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 ANTXRLA6NF34 631 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 TULP3O75386 442 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 RARGP13631 454 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 CUL2Q13617 745 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 ELF2Q15723 593 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 FOXR2Q6PJQ5 311 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 SCD5Q86SK9 330 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 TMEM25Q86YD3 366 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 CCDC33Q8N5R6 958 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 ALLCQ8N6M5 410 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 KCNV2Q8TDN2 545 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 TATDN2Q93075 761 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 DHTKD1Q96HY7 919 aaPredicted RBP17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 CEP63Q96MT8 703 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 DUSP15Q9H1R2 295 aaPredicted RBP17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 ARRDC1-AS1Q9H2J1 176 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 METTL14Q9HCE5 456 aaKnown RBP17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 MARK1Q9P0L2 795 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 DEC1Q9P2X7 70 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 NAGPAQ9UK23 515 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 EML5Q05BV3 1969 aa17.13■□□□□ 0.33
SNRPD3-204ENST00000439775 MYH10P35580 1976 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 SLC30A4O14863 429 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 CACNG3O60359 315 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 KLF8O95600 359 aaPredicted RBP17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 ZNF806P0C7X5 589 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 RALAP11233 206 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 TIE1P35590 1138 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 PLA2G4AP47712 749 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 SLC8A3P57103 927 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 YWHAEP62258 255 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 ANO4Q32M45 955 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 USP39Q53GS9 565 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 RAB41Q5JT25 222 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 EOGTQ5NDL2 527 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 PLA2G2CQ5R387 149 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 C10orf120Q5SQS8 335 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 ANO7Q6IWH7 933 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 Q6ZNB5 142 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 NUDT18Q6ZVK8 323 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 TERB1Q8NA31 727 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 ANKRD52Q8NB46 1076 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 TXNDC5Q8NBS9 432 aaKnown RBP17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 MDGA1Q8NFP4 955 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 MAN1B1Q9UKM7 699 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 ATG2BQ96BY7 2078 aa17.12■□□□□ 0.33
SNRPD3-204ENST00000439775 SGK1O00141 431 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 MDM4O15151 490 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 PMM2O15305 246 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 ALDH1A2O94788 518 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 RHOBTB1O94844 696 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 TBXAS1P24557 533 aaPredicted RBP17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 MPLP40238 635 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 LIMK1P53667 647 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 TMEM92Q6UXU6 159 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 TRMT11Q7Z4G4 463 aaKnown RBP17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 PIGZQ86VD9 579 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 ARHGAP18Q8N392 663 aa17.11■□□□□ 0.33
SNRPD3-204ENST00000439775 NAT16Q8N8M0 369 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms