RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 MRPL45Q9BRJ2 306 aaKnown RBP4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 C11orf70Q9BRQ4 267 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 UBXN6Q9BZV1 441 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 CARD9Q9H257 536 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 CXCL16Q9H2A7 254 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 NPHS2Q9NP85 383 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 OSGEPQ9NPF4 335 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM161AQ9NX61 479 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 ANAPC7Q9UJX3 599 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 PCDHB7Q9Y5E2 793 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 PCDHA3Q9Y5H8 950 aa4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 KIAA0100Q14667 2235 aaKnown RBP4.18□□□□□ -1.74
HMGB1P37-201ENST00000439613 M0QZQ0 153 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 KRIT1O00522 736 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 GABRDO14764 452 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF185O15231 689 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 DDX3YO15523 660 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 PQBP1O60828 265 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CPNE3O75131 537 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RGS9O75916 674 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 POMCP01189 267 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 GHRHP01286 108 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CXCL10P02778 98 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CYP11A1P05108 521 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 KRT7P08729 469 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 PDGFRBP09619 1106 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 PTPN1P18031 435 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 TYMPP19971 482 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CXCR5P32302 372 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTNNA1P35221 906 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 GJA8P48165 433 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RPL34P49207 117 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 AARSP49588 968 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CTCFP49711 727 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 PEX5P50542 639 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CLCNKBP51801 687 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RWDD2BP57060 319 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 C1QTNF8P60827 252 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 TSPY1Q01534 308 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 TLE2Q04725 743 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RNASELQ05823 741 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 BST2Q10589 180 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 IKBKEQ14164 716 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 BRD3Q15059 726 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 MAPRE1Q15691 268 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 HADHQ16836 314 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ODF2Q5BJF6 829 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 EFHC1Q5JVL4 640 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 TEX35Q5T0J7 233 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 SEL1L2Q5TEA6 688 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 WSCD1Q658N2 575 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ELMSAN1Q6PJG2 1045 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 C20orf204Q6ZNR8 217 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 C8orf86Q6ZUL3 223 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ARCQ7LC44 396 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 POLNQ7Z5Q5 900 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 TMEM110Q86TL2 294 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RTN4RL1Q86UN2 441 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 XYLT1Q86Y38 959 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 DNAAF5Q86Y56 855 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RHOT1Q8IXI2 618 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 IFT20Q8IY31 132 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 KATNAL2Q8IYT4 538 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RCOR2Q8IZ40 523 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ABI1Q8IZP0 508 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 THEM5Q8N1Q8 247 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 MICALL1Q8N3F8 863 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 DNAJC5GQ8N7S2 189 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 BEND7Q8N7W2 519 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 NIPA2Q8N8Q9 360 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 B3GALNT2Q8NCR0 500 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 SPATA4Q8NEY3 305 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 EXD1Q8NHP7 514 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CCDC26Q8TAB7 109 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 UBA3Q8TBC4 463 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 MYCBPAPQ8TBZ2 947 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 EPS8L3Q8TE67 593 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 FNIP1Q8TF40 1166 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 GIPC2Q8TF65 315 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLC35F5Q8WV83 523 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 KBTBD7Q8WVZ9 684 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ANKRD7Q92527 254 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CD101Q93033 1021 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ALKBH8Q96BT7 664 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 MCRS1Q96EZ8 462 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ZNF333Q96JL9 665 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 HSFY1Q96LI6 401 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RNPC3Q96LT9 517 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 FAM161BQ96MY7 647 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 RUNDC3BQ96NL0 473 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ACBD6Q9BR61 282 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 CNPY3Q9BT09 278 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 COLEC11Q9BWP8 271 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 DUSP16Q9BY84 665 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 MRPL9Q9BYD2 267 aaKnown RBP4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 HIPK3Q9H422 1215 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 SLITRK6Q9H5Y7 841 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 ST7Q9NRC1 585 aa4.17□□□□□ -1.74
HMGB1P37-201ENST00000439613 HOMER3Q9NSC5 361 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms