RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CASP10Q92851 521 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 DDX23Q9BUQ8 820 aaKnown RBP21.66■■□□□ 1.06
CHD3-204ENST00000439235 TTYH1Q9H313 450 aaPredicted RBP21.66■■□□□ 1.06
CHD3-204ENST00000439235 CLIC5Q9NZA1 410 aa21.66■■□□□ 1.06
CHD3-204ENST00000439235 A0A1W2PQH9 124 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 RALAP11233 206 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 NCAM1P13591 858 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 OGDHQ02218 1023 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 DCAF6Q58WW2 860 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 TCEAL5Q5H9L2 206 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 SLFN11Q7Z7L1 901 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 SCD5Q86SK9 330 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 SLC35F6Q8N357 371 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 UBE2Q2Q8WVN8 375 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 NCAPGQ9BPX3 1015 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 TRPM5Q9NZQ8 1165 aa21.65■■□□□ 1.06
CHD3-204ENST00000439235 CCL16O15467 120 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 RNF8O76064 485 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 FGF19O95750 216 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 ZDHHC11BP0C7U3 371 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 SULT1E1P49888 294 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 ETF1P62495 437 aaKnown RBP21.64■■□□□ 1.05
CHD3-204ENST00000439235 ZNF252P-AS1Q0IIN9 211 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 PABPC1LQ4VXU2 614 aaKnown RBP21.64■■□□□ 1.05
CHD3-204ENST00000439235 TRNP1Q6NT89 227 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 PEX26Q7Z412 305 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 RNF139Q8WU17 664 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 CFAP57Q96MR6 1250 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 GCNAQ96QF7 691 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 CDK5RAP1Q96SZ6 601 aaKnown RBP21.64■■□□□ 1.05
CHD3-204ENST00000439235 SFXN1Q9H9B4 322 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 NMUR1Q9HB89 426 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 OLA1Q9NTK5 396 aaKnown RBP21.64■■□□□ 1.05
CHD3-204ENST00000439235 NAALADL1Q9UQQ1 740 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 ALG6Q9Y672 507 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 ATG2AQ2TAZ0 1938 aa21.64■■□□□ 1.05
CHD3-204ENST00000439235 MYO16Q9Y6X6 1858 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 SPOPO43791 374 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 RFPL2O75678 378 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 FYNP06241 537 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 HYAL1Q12794 435 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 KCNC3Q14003 757 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 GRIN2CQ14957 1233 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 SLC25A52Q3SY17 297 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 CCDC14Q49A88 953 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 RSRC2Q7L4I2 434 aaKnown RBP21.63■■□□□ 1.05
CHD3-204ENST00000439235 TADA2BQ86TJ2 420 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 EFHBQ8N7U6 833 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 LEMD2Q8NC56 503 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 EDEM1Q92611 657 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 IGFLR1Q9H665 355 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 ASAH2Q9NR71 780 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 AMFRQ9UKV5 643 aa21.63■■□□□ 1.05
CHD3-204ENST00000439235 SOX1O00570 391 aaPredicted RBP21.62■■□□□ 1.05
CHD3-204ENST00000439235 FTCDO95954 541 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 RARGP13631 454 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 COMTP21964 271 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 CDC25CP30307 473 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 SNX30Q5VWJ9 437 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 SYPL2Q5VXT5 272 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 MSANTD2Q6P1R3 559 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 STRADAQ7RTN6 431 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 TMC8Q8IU68 726 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 NPY6RQ99463 290 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 CORO1BQ9BR76 489 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 PRKD2Q9BZL6 878 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 GOLPH3Q9H4A6 298 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 ZNF334Q9HCZ1 680 aaPredicted RBP21.62■■□□□ 1.05
CHD3-204ENST00000439235 TMEM51Q9NW97 253 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 USTQ9Y2C2 406 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 JRKLQ9Y4A0 524 aa21.62■■□□□ 1.05
CHD3-204ENST00000439235 ZNF840PA6NDX5 716 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 PTPN2P17706 415 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 POU3F3P20264 500 aaPredicted RBP21.61■■□□□ 1.05
CHD3-204ENST00000439235 TUBP50607 506 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 ATP11AP98196 1134 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 CDO1Q16878 200 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 C15orf59Q2T9L4 293 aaPredicted RBP21.61■■□□□ 1.05
CHD3-204ENST00000439235 TMEM184AQ6ZMB5 413 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 NT5DC3Q86UY8 548 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 ZNF276Q8N554 614 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 CMASQ8NFW8 434 aaPredicted RBP21.61■■□□□ 1.05
CHD3-204ENST00000439235 VN1R2Q8NFZ6 395 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 DQX1Q8TE96 717 aaKnown RBP21.61■■□□□ 1.05
CHD3-204ENST00000439235 FAM172AQ8WUF8 416 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 NT5C3BQ969T7 300 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 WDR24Q96S15 920 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 TBCBQ99426 244 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 GAS2L1Q99501 681 aaPredicted RBP21.61■■□□□ 1.05
CHD3-204ENST00000439235 SMOC2Q9H3U7 446 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 FAM204AQ9H8W3 233 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHD3-204ENST00000439235 OSER1Q9NX31 292 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 DNAI1Q9UI46 699 aa21.61■■□□□ 1.05
CHD3-204ENST00000439235 CCDC195A0A1B0GUA6 201 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 MIF4GDA9UHW6 222 aaKnown RBP21.6■■□□□ 1.05
CHD3-204ENST00000439235 M0QYT0 321 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 TADA3O75528 432 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 PAPLNO95428 1278 aa21.6■■□□□ 1.05
CHD3-204ENST00000439235 F9P00740 461 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms