RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 TMPRSS15P98073 1019 aa16.37■□□□□ 0.21
DHFR-201ENST00000439211 METTL21CQ5VZV1 264 aa16.37■□□□□ 0.21
DHFR-201ENST00000439211 PCNX4Q63HM2 1172 aa16.37■□□□□ 0.21
DHFR-201ENST00000439211 PDCD2LQ9BRP1 358 aa16.37■□□□□ 0.21
DHFR-201ENST00000439211 PARVAQ9NVD7 372 aa16.37■□□□□ 0.21
DHFR-201ENST00000439211 ATP11BQ9Y2G3 1177 aa16.37■□□□□ 0.21
DHFR-201ENST00000439211 CNOT3O75175 753 aaKnown RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 TKTP29401 623 aaKnown RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 ARL1P40616 181 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 GPC3P51654 580 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 NR1H2P55055 460 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 KCNT1Q5JUK3 1230 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 TMEM63BQ5T3F8 832 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 CYP4A22Q5TCH4 519 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 GET4Q7L5D6 327 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 CLVS1Q8IUQ0 354 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 PEX5LQ8IYB4 626 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 THNSL1Q8IYQ7 743 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 ATG4CQ96DT6 458 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 CYLDQ9NQC7 956 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 HEMK1Q9Y5R4 338 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 SH3PXD2BA1X283 911 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 PEX1O43933 1283 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 DGAT1O75907 488 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 TMEM191BP0C7N4 346 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 PSMA2P25787 234 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 KPNA1P52294 538 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 SLC5A3P53794 718 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 VCPP55072 806 aaKnown RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 PLEKHA7Q6IQ23 1121 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 RFX6Q8HWS3 928 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 RHPN2Q8IUC4 686 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 SH3GL1Q99961 368 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 SENP7Q9BQF6 1050 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 SYT11Q9BT88 431 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 ANKEF1Q9NU02 776 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 SAE1Q9UBE0 346 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 CCDC195A0A1B0GUA6 201 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 WEE2P0C1S8 567 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 HMOX2P30519 316 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 PGM5Q15124 567 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 MYLK3Q32MK0 819 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 MAP4K3Q8IVH8 894 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 HNRNPABQ99729 332 aaKnown RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 MRPS26Q9BYN8 205 aaKnown RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 CEP44Q9C0F1 390 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 NMUR2Q9GZQ4 415 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 JPH1Q9HDC5 661 aaPredicted RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 DDX43Q9NXZ2 648 aaKnown RBP16.36■□□□□ 0.21
DHFR-201ENST00000439211 IP6K2Q9UHH9 426 aa16.36■□□□□ 0.21
DHFR-201ENST00000439211 H0YCG3 227 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 EIF3FO00303 357 aaPredicted RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 MAPTP10636 758 aaKnown RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 GTF2H1P32780 548 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 NLRP11P59045 1033 aaKnown RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 CCNG2Q16589 344 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 SCYL2Q6P3W7 929 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 AMIGO2Q86SJ2 522 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 FEZF2Q8TBJ5 459 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 BSNDQ8WZ55 320 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 MRIQ9BWK5 157 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 RABL2AQ9UBK7 228 aaPredicted RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 CCNE2O96020 404 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 ATXN3P54252 364 aaPredicted RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 CENPCQ03188 943 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 CUL2Q13617 745 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 PTK6Q13882 451 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 PRAMEF18Q5VWM3 479 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 TMC2Q8TDI7 906 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 HSPH1Q92598 858 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 SATB2Q9UPW6 733 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 ADGRA3Q8IWK6 1321 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 FOXD2O60548 495 aaPredicted RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 HADHBP55084 474 aaKnown RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 ARL4CP56559 192 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 RPL7AP62424 266 aaKnown RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 HIF1AQ16665 826 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 TCHHL1Q5QJ38 904 aaPredicted RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 C1orf220Q5T0J3 134 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 MFSD7Q6UXD7 560 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 PDSS2Q86YH6 399 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 TTLL6Q8N841 843 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 CLIP3Q96DZ5 547 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 PANX3Q96QZ0 392 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 SLX1AQ9BQ83 275 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 C12orf65Q9H3J6 166 aaKnown RBP16.35■□□□□ 0.21
DHFR-201ENST00000439211 NRDE2Q9H7Z3 1164 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 S100A14Q9HCY8 104 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 SLC7A8Q9UHI5 535 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 INPP5FQ9Y2H2 1132 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 TELO2Q9Y4R8 837 aa16.35■□□□□ 0.21
DHFR-201ENST00000439211 TNRC6CQ9HCJ0 1690 aaKnown RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 BANF1O75531 89 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 ZBTB48P10074 688 aaPredicted RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 HADHQ16836 314 aaKnown RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 ALYREFQ86V81 257 aaKnown RBP16.34■□□□□ 0.21
DHFR-201ENST00000439211 TMEM35BQ8NCS4 154 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 OSBPL6Q9BZF3 934 aa16.34■□□□□ 0.21
DHFR-201ENST00000439211 SLC9A2Q9UBY0 812 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms