RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 A0A0B4J269 797 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 METTL12A8MUP2 240 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 GFRA2O00451 464 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 HNRNPDLO14979 420 aaKnown RBP11.89□□□□□ -0.51
CSTF3-203ENST00000438862 HOXC11O43248 304 aaPredicted RBP11.89□□□□□ -0.51
CSTF3-203ENST00000438862 PCDHGA12O60330 932 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 CTDNEP1O95476 244 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 PIGRP01833 764 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 C1SP09871 688 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 C6P13671 934 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 FDPSP14324 419 aaKnown RBP11.89□□□□□ -0.51
CSTF3-203ENST00000438862 OXTRP30559 389 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 IL12RB1P42701 662 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 CXADRP78310 365 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 POU5F1Q01860 360 aaKnown RBP11.89□□□□□ -0.51
CSTF3-203ENST00000438862 MYO1EQ12965 1108 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 TRIM29Q14134 588 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 ZNF174Q15697 407 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 CCDC157Q569K6 752 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 DCAF12L1Q5VU92 463 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 VSTM1Q6UX27 236 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 DENND5BQ6ZUT9 1274 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 SNX29Q8TEQ0 813 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 TOE1Q96GM8 510 aaKnown RBP11.89□□□□□ -0.51
CSTF3-203ENST00000438862 ZNF560Q96MR9 790 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 PKMYT1Q99640 499 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 GPR174Q9BXC1 333 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 RAB34Q9BZG1 259 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 ITM2CQ9NQX7 267 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 LARSQ9P2J5 1176 aaKnown RBP11.89□□□□□ -0.51
CSTF3-203ENST00000438862 PCDHGA1Q9Y5H4 931 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 ATMQ13315 3056 aa11.89□□□□□ -0.51
CSTF3-203ENST00000438862 ZNF840PA6NDX5 716 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 ST8SIA5O15466 376 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 HUS1O60921 280 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 PCSK1P29120 753 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 LHX1P48742 406 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 NCKAP1LP55160 1127 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 TLE3Q04726 772 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 SF3A1Q15459 793 aaKnown RBP11.88□□□□□ -0.51
CSTF3-203ENST00000438862 INAVAQ3KP66 663 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 EGFLAMQ63HQ2 1017 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
CSTF3-203ENST00000438862 C4orf50Q6ZRC1 276 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 NT5DC4Q86YG4 428 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 MIB1Q86YT6 1006 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 CCDC83Q8IWF9 413 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 PDCL2Q8N4E4 241 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 NECAB1Q8N987 351 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 IGSF22Q8N9C0 903 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
CSTF3-203ENST00000438862 TMEM176AQ96HP8 235 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 DUSP9Q99956 384 aaKnown RBP11.88□□□□□ -0.51
CSTF3-203ENST00000438862 TTLL2Q9BWV7 592 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 CD93Q9NPY3 652 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 SMPD4Q9NXE4 827 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 GMIPQ9P107 970 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 MGAQ8IWI9 3026 aa11.88□□□□□ -0.51
CSTF3-203ENST00000438862 A0A1B0GVT2 93 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 DTNBO60941 627 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 OAS1P00973 400 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ACAT1P24752 427 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ACTN2P35609 894 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 GRIK1P39086 918 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 CSNK1EP49674 416 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 CSRP3P50461 194 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 AFF3P51826 1226 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ZNF132P52740 706 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ST3GAL1Q11201 340 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 TEAD4Q15561 434 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ANO4Q32M45 955 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 KRT79Q5XKE5 535 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 GRAMD4Q6IC98 578 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 FAM171BQ6P995 826 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 KCTD17Q8N5Z5 321 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 C1orf216Q8TAB5 229 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 SCFD1Q8WVM8 642 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 IGSF8Q969P0 613 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ACOX2Q99424 681 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 ARID3AQ99856 593 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 PCED1AQ9H1Q7 454 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 SLC6A17Q9H1V8 727 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 SPHK2Q9NRA0 654 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 KCND2Q9NZV8 630 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 USP36Q9P275 1121 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 MAGEC2Q9UBF1 373 aaPredicted RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 FTSJ1Q9UET6 329 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 EIF2B4Q9UI10 523 aaKnown RBP11.87□□□□□ -0.51
CSTF3-203ENST00000438862 PIEZO2Q9H5I5 2752 aa11.87□□□□□ -0.51
CSTF3-203ENST00000438862 SCAMP3O14828 347 aaKnown RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 DFNA5O60443 496 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 ABL1P00519 1130 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 HSP90AA1P07900 732 aaKnown RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 MBL2P11226 248 aaPredicted RBP11.86□□□□□ -0.51
CSTF3-203ENST00000438862 PDCP20941 246 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 ANXA13P27216 316 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 ACOT2P49753 483 aa11.86□□□□□ -0.51
CSTF3-203ENST00000438862 CCT8P50990 548 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms