RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SPATA31A7Q8IWB4 1347 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 MYO9AB2RTY4 2548 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 NRXN1Q9ULB1 1477 aa3.67□□□□□ -1.82
HMGB1P18-201ENST00000438801 CFAP46Q8IYW2 2715 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 DCHS1Q96JQ0 3298 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 KIF15Q9NS87 1388 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 LMTK2Q8IWU2 1503 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 ERC2O15083 957 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 TJP3O95049 919 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 SNUPNO95149 360 aaKnown RBP3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 UNC5CO95185 931 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 NTN1O95631 604 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 GRPP07492 148 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 MAP2K2P36507 400 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 KCNJ5P48544 419 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 PLCD1P51178 756 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 TPTEP56180 551 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 FHL1Q13642 323 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 LAMB3Q13751 1172 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 TRIP6Q15654 476 aaKnown RBP3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 TBC1D25Q3MII6 688 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 FCRL6Q6DN72 434 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 AWAT2Q6E213 333 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 MIS18BP1Q6P0N0 1132 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 CATIPQ7Z7H3 387 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 ABHD11Q8NFV4 315 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 HMCESQ96FZ2 354 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 SLC35A4Q96G79 324 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 RITA1Q96K30 269 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 MOGAT1Q96PD6 335 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 TMEM79Q9BSE2 394 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 WACQ9BTA9 647 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 ASPSCR1Q9BZE9 553 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 ADGRL3Q9HAR2 1447 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 SAMD9Q5K651 1589 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 HELZ2Q9BYK8 2649 aaKnown RBP3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 WDR17Q8IZU2 1322 aa3.66□□□□□ -1.82
HMGB1P18-201ENST00000438801 CEP250Q9BV73 2442 aa3.65□□□□□ -1.82
HMGB1P18-201ENST00000438801 SBF2Q86WG5 1849 aa3.65□□□□□ -1.82
HMGB1P18-201ENST00000438801 SBNO2Q9Y2G9 1366 aa3.65□□□□□ -1.82
HMGB1P18-201ENST00000438801 MYO5CQ9NQX4 1742 aa3.65□□□□□ -1.82
HMGB1P18-201ENST00000438801 SPATA31E1Q6ZUB1 1445 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 POC1B-GALNT4F8VUJ3 575 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 hCG_1984214I3L0E3 225 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 EXOC3O60645 756 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 BCAR3O75815 825 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 PDE8BO95263 885 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 VIPR2P41587 438 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 FOXG1P55316 489 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 GPSM2P81274 684 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 RABEP1Q15276 862 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 PKN2Q16513 984 aaKnown RBP3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 KHDC1LQ5JSQ8 128 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 TMEM240Q5SV17 173 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 PXDC1Q5TGL8 231 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 KIRREL2Q6UWL6 708 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 KRT73Q86Y46 540 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 GALNT4Q8N4A0 578 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 PRSS3P2Q8NHM4 247 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 GUCD1Q96NT3 240 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 THAP7Q9BT49 309 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 GTPBP4Q9BZE4 634 aaKnown RBP3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 SARS2Q9NP81 518 aaKnown RBP3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 XPR1Q9UBH6 696 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 PCDHA6Q9UN73 950 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 SHOC2Q9UQ13 582 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 MRPS17Q9Y2R5 130 aaKnown RBP3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 SYCP2Q9BX26 1530 aa3.65□□□□□ -1.83
HMGB1P18-201ENST00000438801 NALCNQ8IZF0 1738 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 RBBP6Q7Z6E9 1792 aaKnown RBP3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 NOS1P29475 1434 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 CRB1P82279 1406 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 PLEKHD1A6NEE1 506 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 IL33O95760 270 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 DLDP09622 509 aaKnown RBP3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 EN2P19622 333 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 LRPAP1P30533 357 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 PDE6CP51160 858 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 SATB1Q01826 763 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZNF260Q3ZCT1 412 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 CERKLQ49MI3 558 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 Q4G0T1 1027 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 L1TD1Q5T7N2 865 aaKnown RBP3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 MTHFD1LQ6UB35 978 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 ZNF517Q6ZMY9 492 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 SLC15A3Q8IY34 581 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 TERB1Q8NA31 727 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 SOCS4Q8WXH5 440 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 HSPBAP1Q96EW2 488 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 MVB12AQ96EY5 273 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 CDK5RAP3Q96JB5 506 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 SNX18Q96RF0 628 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 KLHL13Q9P2N7 655 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 GABRQQ9UN88 632 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 FYCO1Q9BQS8 1478 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 WDFY4Q6ZS81 3184 aa3.64□□□□□ -1.83
HMGB1P18-201ENST00000438801 ERBINQ96RT1 1412 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 HTTP42858 3142 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 GLTPD2A6NH11 291 aa3.63□□□□□ -1.83
HMGB1P18-201ENST00000438801 E5RJQ4 531 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms