RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 JRKLQ9Y4A0 524 aa10.17□□□□□ -0.78
CUBN-204ENST00000438254 YIPF1Q9Y548 306 aa10.17□□□□□ -0.78
CUBN-204ENST00000438254 ALG6Q9Y672 507 aa10.17□□□□□ -0.78
CUBN-204ENST00000438254 LAMA3Q16787 3333 aa10.17□□□□□ -0.78
CUBN-204ENST00000438254 TRANK1O15050 2925 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SLC38A8A6NNN8 435 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 MYO1FO00160 1098 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SART1O43290 800 aaKnown RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 DAB1O75553 588 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 ENDOD1O94919 500 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 ATP1A1P05023 1023 aaKnown RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 ADH1AP07327 375 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 USP17L7P0C7H9 530 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 ZDHHC11BP0C7U3 371 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 HMGA1P17096 107 aaKnown RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 COMTP21964 271 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SLC1A1P43005 524 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 PTPN9P43378 593 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 CLCN4P51793 760 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 ZNF143P52747 638 aaPredicted RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 YWHAZP63104 245 aaKnown RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 EIF4EBP2Q13542 120 aaPredicted RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 MTMR3Q13615 1198 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 KCNC3Q14003 757 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 PIGHQ14442 188 aaPredicted RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 MESDQ14696 234 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 ACAP1Q15027 740 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 LRIT3Q3SXY7 679 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 CCDC14Q49A88 953 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 PLPP4Q5VZY2 271 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 DENND5BQ6ZUT9 1274 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 CYP4V2Q6ZWL3 525 aaPredicted RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 DAAM2Q86T65 1068 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SYCE1Q8N0S2 351 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SIX6OS1Q8N1H7 587 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 STKLD1Q8NE28 680 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SLC22A17Q8WUG5 538 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 RXFP2Q8WXD0 754 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 CENPIQ92674 756 aaPredicted RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 ALS2CR12Q96Q35 445 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 NPY6RQ99463 290 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 SEPT5Q99719 369 aaPredicted RBP10.16□□□□□ -0.78
CUBN-204ENST00000438254 EMILIN2Q9BXX0 1053 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 FBXO44Q9H4M3 255 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 NMUR1Q9HB89 426 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 ENTPD7Q9NQZ7 604 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 IP6K2Q9UHH9 426 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 DNAI1Q9UI46 699 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 INSL5Q9Y5Q6 135 aa10.16□□□□□ -0.78
CUBN-204ENST00000438254 A0A1W2PPC1 479 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 DDX3YO15523 660 aaKnown RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 CLASP2O75122 1294 aaKnown RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 LRCH4O75427 683 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 GRAP2O75791 330 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 RTN3O95197 1032 aaPredicted RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 FTCDO95954 541 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 IGLV3-25P01717 112 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 LTFP02788 710 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 PRLRP16471 622 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 TFE3P19532 575 aaPredicted RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 GPD1P21695 349 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 MATKP42679 507 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 PEX5P50542 639 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 NAP1L1P55209 391 aaKnown RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 TAS2R40P59535 323 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 PITX1P78337 314 aaPredicted RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 RAB6CQ53S08 254 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 SH3PXD2AQ5TCZ1 1133 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 SNX30Q5VWJ9 437 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 SYPL2Q5VXT5 272 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 DCUN1D2Q6PH85 259 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 RTL10Q7L3V2 364 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 DEFB106AQ8N104 65 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 ZNF276Q8N554 614 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 GPR152Q8TDT2 470 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 TIFAQ96CG3 184 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 PGAP3Q96FM1 320 aaPredicted RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 TRMT2BQ96GJ1 504 aaKnown RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 NAPGQ99747 312 aaPredicted RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 CNPY3Q9BT09 278 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 LRRC3Q9BY71 257 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 RAB6CQ9H0N0 254 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 CERS4Q9HA82 394 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 SLC28A3Q9HAS3 691 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 CYP4F11Q9HBI6 524 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 POPDC2Q9HBU9 364 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 OSER1Q9NX31 292 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 CALCOCO1Q9P1Z2 691 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 PACSIN2Q9UNF0 486 aaPredicted RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 HYOU1Q9Y4L1 999 aa10.15□□□□□ -0.78
CUBN-204ENST00000438254 ZNF638Q14966 1978 aaKnown RBP10.15□□□□□ -0.78
CUBN-204ENST00000438254 MTCL1Q9Y4B5 1905 aaKnown RBP10.15□□□□□ -0.79
CUBN-204ENST00000438254 MYO16Q9Y6X6 1858 aa10.15□□□□□ -0.79
CUBN-204ENST00000438254 ENC1O14682 589 aa10.14□□□□□ -0.79
CUBN-204ENST00000438254 NCK2O43639 380 aa10.14□□□□□ -0.79
CUBN-204ENST00000438254 TADA3O75528 432 aa10.14□□□□□ -0.79
CUBN-204ENST00000438254 GLUD1P00367 558 aa10.14□□□□□ -0.79
CUBN-204ENST00000438254 CSH1P0DML2 217 aa10.14□□□□□ -0.79
CUBN-204ENST00000438254 CSH2P0DML3 217 aa10.14□□□□□ -0.79
CUBN-204ENST00000438254 TCF4P15884 667 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms