RNA–Protein interactions for RNA: ENST00000438146.6

RBFOX2-209, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-209ENST00000438146 E5RJQ4 531 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 ARSAP15289 507 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 EFEMP1Q12805 493 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 BTBD8Q5XKL5 378 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 SMYD5Q6GMV2 418 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 TPRG1Q6ZUI0 275 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 DDX1Q92499 740 aaKnown RBP25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 WBP2Q969T9 261 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 SLC4A5Q9BY07 1137 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 CLIC5Q9NZA1 410 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 RASAL2Q9UJF2 1139 aa25.02■■□□□ 1.6
RBFOX2-209ENST00000438146 MMEP08473 750 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 CD72P21854 359 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 SOX9P48436 509 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 IFNAR2P48551 515 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 PLCB2Q00722 1185 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 BSPRYQ5W0U4 402 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 EPS8L1Q8TE68 723 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 CPXM1Q96SM3 734 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 FAM83CQ9BQN1 747 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 LHX5Q9H2C1 402 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 LINC00597Q9H2U6 94 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 TBC1D17Q9HA65 648 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 HPS4Q9NQG7 708 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 DNMT3LQ9UJW3 386 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 CEP83Q9Y592 693 aa25.01■■□□□ 1.59
RBFOX2-209ENST00000438146 A0A1W2PQC6 194 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 TCF3P15923 654 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 ACADSBP45954 432 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 RPL34P49207 117 aaKnown RBP25■■□□□ 1.59
RBFOX2-209ENST00000438146 KPNA1P52294 538 aaPredicted RBP25■■□□□ 1.59
RBFOX2-209ENST00000438146 TADA2BQ86TJ2 420 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 STK32AQ8WU08 396 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 OSCP1Q8WVF1 389 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 PPP1R13BQ96KQ4 1090 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 KLF16Q9BXK1 252 aaPredicted RBP25■■□□□ 1.59
RBFOX2-209ENST00000438146 NOCTQ9UK39 431 aaKnown RBP25■■□□□ 1.59
RBFOX2-209ENST00000438146 SH3BP1Q9Y3L3 701 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 PIAS3Q9Y6X2 628 aa25■■□□□ 1.59
RBFOX2-209ENST00000438146 PAPSS1O43252 624 aaPredicted RBP24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 FBXO21O94952 628 aa24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 HMBSP08397 361 aa24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 DDX42Q86XP3 938 aaKnown RBP eCLIP24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 IRGQQ8WZA9 623 aa24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 FOXQ1Q9C009 403 aa24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 TRPV5Q9NQA5 729 aa24.99■■□□□ 1.59
RBFOX2-209ENST00000438146 OTOL1A6NHN0 477 aaPredicted RBP24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 RUNX3Q13761 415 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 PDGFRLQ15198 375 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 CWF19L1Q69YN2 538 aaKnown RBP24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 KLHDC10Q6PID8 442 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 BMP8AQ7Z5Y6 402 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 TMEM110Q86TL2 294 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 SCML4Q8N228 414 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 FBXL6Q8N531 539 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 RNF139Q8WU17 664 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 BAP1Q92560 729 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 FAM149B1Q96BN6 582 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 NOX5Q96PH1 765 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 CDK5RAP1Q96SZ6 601 aaKnown RBP24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 XPO4Q9C0E2 1151 aaKnown RBP24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 MARCH2Q9P0N8 246 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 HELZP42694 1942 aaKnown RBP24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 TICRRQ7Z2Z1 1910 aa24.98■■□□□ 1.59
RBFOX2-209ENST00000438146 LTFP02788 710 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 ERBB2P04626 1255 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 CHRNB2P17787 502 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 CDR2Q01850 454 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 PRKCQQ04759 706 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 EML3Q32P44 896 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 ITPRIPL2Q3MIP1 535 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 PTPN20Q4JDL3 420 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 SUGP1Q8IWZ8 645 aaKnown RBP24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 TMEM35BQ8NCS4 154 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 GOLGA1Q92805 767 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 SHDQ96IW2 340 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 SYNCQ9H7C4 482 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 ABCC13Q9NSE7 274 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 SFMBT1Q9UHJ3 866 aa24.97■■□□□ 1.59
RBFOX2-209ENST00000438146 SLC12A8A0AV02 714 aa24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 LRRC53A6NM62 1247 aa24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 VCPP55072 806 aaKnown RBP24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 STARD6P59095 220 aa24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 UBXN2BQ14CS0 331 aa24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 NAA35Q5VZE5 725 aa24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 ZNF276Q8N554 614 aa24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 PIWIL1Q96J94 861 aaKnown RBP24.96■■□□□ 1.59
RBFOX2-209ENST00000438146 COL4A2P08572 1712 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 PI15O43692 258 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 PBX1P40424 430 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 FMO1Q01740 532 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 GOLGA8FQ08AF8 430 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 GOLGA8DPQ0D2H9 430 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 TAF5Q15542 800 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 OR6B2Q6IFH4 312 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 BBS7Q8IWZ6 715 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 IPO4Q8TEX9 1081 aaKnown RBP24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 CPA5Q8WXQ8 436 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 ATP2A3Q93084 1043 aa24.95■■□□□ 1.59
RBFOX2-209ENST00000438146 ECT2Q9H8V3 914 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms