RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 MKRN2Q9H000 416 aaKnown RBP13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ABCB6Q9NP58 842 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KCNK4Q9NYG8 393 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BOD1L1Q8NFC6 3051 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ZNF840PA6NDX5 716 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 E9PMD0 336 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 HOXC11O43248 304 aaPredicted RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 OLFM2O95897 454 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ABL1P00519 1130 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 MAPTP10636 758 aaKnown RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 GP1BBP13224 206 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 MCM7P33993 719 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CCT6AP40227 531 aaKnown RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ACADVLP49748 655 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PDE6CP51160 858 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TPMTP51580 245 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 AFF3P51826 1226 aaKnown RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ANO4Q32M45 955 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 FUT11Q495W5 492 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KMT5BQ4FZB7 885 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 INTS6LQ5JSJ4 861 aaKnown RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PRAMEF14Q5SWL7 426 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BTBD8Q5XKL5 378 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PDCL2Q8N4E4 241 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KIAA1958Q8N8K9 716 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ZNF248Q8NDW4 579 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ERMNQ8TAM6 284 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 SNX19Q92543 992 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 WBP2Q969T9 261 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CNDP2Q96KP4 475 aaKnown RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 NTPCRQ9BSD7 190 aaKnown RBP13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TRPM5Q9NZQ8 1165 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TCHHQ07283 1943 aa13.13□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KPNA7A9QM74 516 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 LDOC1O95751 146 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 XBP1P17861 261 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 RAD51AP2Q09MP3 1159 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TMEM132DQ14C87 1099 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BROXQ5VW32 411 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 SCARA3Q6AZY7 606 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CPLX2Q6PUV4 134 aaKnown RBP13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 OSTM1Q86WC4 334 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BBS7Q8IWZ6 715 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 IGSF8Q969P0 613 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ZNF274Q96GC6 653 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 HIC2Q96JB3 615 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ALG2Q9H553 416 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 DDX19AQ9NUU7 478 aaKnown RBP13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 DDX43Q9NXZ2 648 aaKnown RBP13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PCDHB6Q9Y5E3 794 aa13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 HEMK1Q9Y5R4 338 aaPredicted RBP13.12□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 UTP20O75691 2785 aaKnown RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 OAS1P00973 400 aaKnown RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 MBL2P11226 248 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 MYF5P13349 255 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PFKLP17858 780 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 NR6A1Q15406 480 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CFAP221Q4G0U5 840 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 GRAMD4Q6IC98 578 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 RINT1Q6NUQ1 792 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ZNF574Q6ZN55 896 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 C1orf186Q6ZWK4 172 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CACUL1Q86Y37 369 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 SPATA2LQ8IUW3 424 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 EXD3Q8N9H8 876 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BICD1Q96G01 975 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TSPAN18Q96SJ8 248 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ACBD6Q9BR61 282 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 C6orf106Q9H6K1 298 aaPredicted RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 SPHK2Q9NRA0 654 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 DNAJC17Q9NVM6 304 aaKnown RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 DPP3Q9NY33 737 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TBC1D14Q9P2M4 693 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CPSF3Q9UKF6 684 aaKnown RBP13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 L1RE1Q9UN81 338 aa13.11□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 NUMA1Q14980 2115 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CREBBPQ92793 2442 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BSNQ9UPA5 3926 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 OGTO15294 1046 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KLK10O43240 276 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ATP2C2O75185 946 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KRT38O76015 456 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 C1SP09871 688 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 GLDCP23378 1020 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CTSKP43235 329 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 EMP3P54852 163 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 UCNP55089 124 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PCBP4P57723 403 aaKnown RBP13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 RETREG3Q86VR2 466 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 SNRNP27Q8WVK2 155 aaKnown RBP13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 LRWD1Q9UFC0 647 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PCDHB1Q9Y5F3 818 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 STON1Q9Y6Q2 735 aa13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 USP9YO00507 2555 aaPredicted RBP13.1□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ABCA12Q86UK0 2595 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms