RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 PSEN1P49768 467 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 TAF10Q12962 218 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 SLC25A52Q3SY17 297 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 DAB2IPQ5VWQ8 1189 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 SYPL2Q5VXT5 272 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 BTBD8Q5XKL5 378 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 SCD5Q86SK9 330 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 NT5C3BQ969T7 300 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 MYRFLQ96LU7 910 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 SLITRK1Q96PX8 696 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 NPY6RQ99463 290 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 SNX12Q9UMY4 172 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 MAGED2Q9UNF1 606 aaPredicted RBP24.05■■□□□ 1.44
CPSF4-204ENST00000436336 DENND4CQ5VZ89 1909 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 ANAPC1Q9H1A4 1944 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 CHD7Q9P2D1 2997 aa24.05■■□□□ 1.44
CPSF4-204ENST00000436336 EPOPA6NHQ4 379 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 C8AP07357 584 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 HMGA1P17096 107 aaKnown RBP24.04■■□□□ 1.44
CPSF4-204ENST00000436336 ATP11AP98196 1134 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 TAF12Q16514 161 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 CDO1Q16878 200 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 STRADAQ7RTN6 431 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 ITIH5Q86UX2 942 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 RHOT1Q8IXI2 618 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 UBL4BQ8N7F7 174 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 FAM172AQ8WUF8 416 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 OVCA2Q8WZ82 227 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 CENPIQ92674 756 aaPredicted RBP24.04■■□□□ 1.44
CPSF4-204ENST00000436336 TRMT2BQ96GJ1 504 aaKnown RBP24.04■■□□□ 1.44
CPSF4-204ENST00000436336 PLEKHA4Q9H4M7 779 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 NMUR1Q9HB89 426 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 TLR8Q9NR97 1041 aaKnown RBP24.04■■□□□ 1.44
CPSF4-204ENST00000436336 GMIPQ9P107 970 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 ASB3Q9Y575 518 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 PCDHA3Q9Y5H8 950 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 SAR1BQ9Y6B6 198 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 MYO7AQ13402 2215 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 A0A1W2PPC1 479 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 A0A1W2PQH9 124 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 DDX3YO15523 660 aaKnown RBP24.04■■□□□ 1.44
CPSF4-204ENST00000436336 PSTPIP1O43586 416 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 LRG1P02750 347 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 PCK1P35558 622 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 SULT1E1P49888 294 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 AMPD2Q01433 879 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 ARFGAP1Q8N6T3 406 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 PDZD8Q8NEN9 1154 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 EDEM1Q92611 657 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 PSMG2Q969U7 264 aa24.04■■□□□ 1.44
CPSF4-204ENST00000436336 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.04■■□□□ 1.44
CPSF4-204ENST00000436336 URI1O94763 535 aaPredicted RBP24.03■■□□□ 1.44
CPSF4-204ENST00000436336 TCP1P17987 556 aaKnown RBP24.03■■□□□ 1.44
CPSF4-204ENST00000436336 SSR1P43307 286 aaKnown RBP24.03■■□□□ 1.44
CPSF4-204ENST00000436336 TAS2R40P59535 323 aa24.03■■□□□ 1.44
CPSF4-204ENST00000436336 HADHQ16836 314 aaKnown RBP24.03■■□□□ 1.44
CPSF4-204ENST00000436336 SH3PXD2AQ5TCZ1 1133 aa24.03■■□□□ 1.44
CPSF4-204ENST00000436336 SLC22A17Q8WUG5 538 aa24.03■■□□□ 1.44
CPSF4-204ENST00000436336 HDAC7Q8WUI4 952 aa24.03■■□□□ 1.44
CPSF4-204ENST00000436336 TBCBQ99426 244 aa24.03■■□□□ 1.44
CPSF4-204ENST00000436336 CLIC5Q9NZA1 410 aa24.03■■□□□ 1.44
CPSF4-204ENST00000436336 ENDOD1O94919 500 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 ZDHHC11BP0C7U3 371 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 DNA2P51530 1060 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 LRRC38Q5VT99 294 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 BNIPLQ7Z465 357 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 DNAJB7Q7Z6W7 309 aaPredicted RBP24.02■■□□□ 1.44
CPSF4-204ENST00000436336 KRT35Q92764 455 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 OSBPL9Q96SU4 736 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 UXTQ9UBK9 157 aaPredicted RBP24.02■■□□□ 1.44
CPSF4-204ENST00000436336 DPP7Q9UHL4 492 aa24.02■■□□□ 1.44
CPSF4-204ENST00000436336 TFE3P19532 575 aaPredicted RBP24.01■■□□□ 1.43
CPSF4-204ENST00000436336 MIPP30301 263 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 PGFP49763 221 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 PEX5P50542 639 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 LRIT3Q3SXY7 679 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 PGAP3Q96FM1 320 aaPredicted RBP24.01■■□□□ 1.43
CPSF4-204ENST00000436336 MAN1C1Q9NR34 630 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 OSER1Q9NX31 292 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 M0QYT0 321 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 KCNK3O14649 394 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 PER2O15055 1255 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 TCF4P15884 667 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 HDAC4P56524 1084 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 SLC25A11Q02978 314 aaKnown RBP24.01■■□□□ 1.43
CPSF4-204ENST00000436336 TUBB2AQ13885 445 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 PPM1LQ5SGD2 360 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 OTUD1Q5VV17 481 aaPredicted RBP24.01■■□□□ 1.43
CPSF4-204ENST00000436336 POLNQ7Z5Q5 900 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 ADGRD2Q7Z7M1 963 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 RNF139Q8WU17 664 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 MRPL38Q96DV4 380 aaKnown RBP24.01■■□□□ 1.43
CPSF4-204ENST00000436336 PSMB7Q99436 277 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 TUBB2BQ9BVA1 445 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 ADAM33Q9BZ11 813 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 USP18Q9UMW8 372 aa24.01■■□□□ 1.43
CPSF4-204ENST00000436336 ZMYND10O75800 440 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 RALAP11233 206 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 EPCAMP16422 314 aa24■■□□□ 1.43
CPSF4-204ENST00000436336 PPP3CCP48454 512 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms