RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ULBP1Q9BZM6 244 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 LRRC4Q9HBW1 653 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 LMBRD1Q9NUN5 540 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 RASAL2Q9UJF2 1139 aa19.25■□□□□ 0.67
HMGN1-207ENST00000436324 SMG5Q9UPR3 1016 aaKnown RBP19.25■□□□□ 0.67
HMGN1-207ENST00000436324 O00370 1275 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 XPO1O14980 1071 aaKnown RBP19.24■□□□□ 0.67
HMGN1-207ENST00000436324 HMBSP08397 361 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 PAEPP09466 180 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 BRD2P25440 801 aaKnown RBP19.24■□□□□ 0.67
HMGN1-207ENST00000436324 PLA2G4AP47712 749 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 PSEN1P49768 467 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 KDSRQ06136 332 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 GOLGA8FQ08AF8 430 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 GOLGA8DPQ0D2H9 430 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 MESP2Q0VG99 397 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 EFEMP1Q12805 493 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 ANO4Q32M45 955 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 C2orf27AQ580R0 203 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 RAB41Q5JT25 222 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 PRR23BQ6ZRT6 265 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 HTR3DQ70Z44 454 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 LONP2Q86WA8 852 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 TMEM25Q86YD3 366 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 SFTPA1Q8IWL2 248 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 RBBP8NLQ8NC74 664 aaPredicted RBP19.24■□□□□ 0.67
HMGN1-207ENST00000436324 OTUB2Q96DC9 234 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 KREMEN1Q96MU8 473 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 PNKPQ96T60 521 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 SPHK2Q9NRA0 654 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 LSM7Q9UK45 103 aaKnown RBP19.24■□□□□ 0.67
HMGN1-207ENST00000436324 KIAA1257Q9ULG3 409 aa19.24■□□□□ 0.67
HMGN1-207ENST00000436324 MYO16Q9Y6X6 1858 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 K7EQS6 105 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 HRO43593 1189 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 GREM1O60565 184 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 ZBED1O96006 694 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 RGS7P49802 495 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 YWHAGP61981 247 aaKnown RBP eCLIP19.23■□□□□ 0.67
HMGN1-207ENST00000436324 GAD2Q05329 585 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 C1QBPQ07021 282 aaKnown RBP19.23■□□□□ 0.67
HMGN1-207ENST00000436324 ADIGQ0VDE8 80 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 DPCR1Q3MIW9 517 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 BTBD8Q5XKL5 378 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 TPGS1Q6ZTW0 290 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 RSRC2Q7L4I2 434 aaKnown RBP19.23■□□□□ 0.67
HMGN1-207ENST00000436324 TADA2BQ86TJ2 420 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 ARHGAP18Q8N392 663 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 RUBCNQ92622 972 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 HHIPQ96QV1 700 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 ZSWIM1Q9BR11 485 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 EPC1Q9H2F5 836 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 UBE2TQ9NPD8 197 aaPredicted RBP19.23■□□□□ 0.67
HMGN1-207ENST00000436324 CLIC5Q9NZA1 410 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 NCDNQ9UBB6 729 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 ATG2BQ96BY7 2078 aa19.23■□□□□ 0.67
HMGN1-207ENST00000436324 PTPRZ1P23471 2315 aaPredicted RBP19.22■□□□□ 0.67
HMGN1-207ENST00000436324 M0QYV0 167 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 PIK3R2O00459 728 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 APODP05090 189 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 KRT5P13647 590 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 LCP1P13796 627 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 MTIF2P46199 727 aaKnown RBP19.22■□□□□ 0.67
HMGN1-207ENST00000436324 GCNT1Q02742 428 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 GJB7Q6PEY0 223 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 KLHDC10Q6PID8 442 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 LCLAT1Q6UWP7 414 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 IRF2BP1Q8IU81 584 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 USP33Q8TEY7 942 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 IPO9Q96P70 1041 aaKnown RBP19.22■□□□□ 0.67
HMGN1-207ENST00000436324 CDK5RAP1Q96SZ6 601 aaKnown RBP19.22■□□□□ 0.67
HMGN1-207ENST00000436324 ARHGEF4Q9NR80 690 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 RAB23Q9ULC3 237 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 FANCMQ8IYD8 2048 aa19.22■□□□□ 0.67
HMGN1-207ENST00000436324 STC2O76061 302 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 KAT7O95251 611 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 SETSIPP0DME0 302 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 APBA1Q02410 837 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 SIM2Q14190 667 aaPredicted RBP19.21■□□□□ 0.67
HMGN1-207ENST00000436324 DMC1Q14565 340 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 CNGA2Q16280 664 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 HSP90AA4PQ58FG1 418 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 CLEC17AQ6ZS10 378 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 WDR5BQ86VZ2 330 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 KIAA2013Q8IYS2 634 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 SIX6OS1Q8N1H7 587 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 CCDC33Q8N5R6 958 aa19.21■□□□□ 0.67
HMGN1-207ENST00000436324 SECISBP2LQ93073 1101 aaKnown RBP19.21■□□□□ 0.67
HMGN1-207ENST00000436324 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.21■□□□□ 0.67
HMGN1-207ENST00000436324 SLC12A8A0AV02 714 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 NEDD8-MDP1E9PL57 170 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 SLC9A1P19634 815 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 TIE1P35590 1138 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 PKDCCQ504Y2 493 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 EMC10Q5UCC4 262 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 PM20D1Q6GTS8 502 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 CEP68Q76N32 757 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 SYT13Q7L8C5 426 aa19.2■□□□□ 0.66
HMGN1-207ENST00000436324 ZNF276Q8N554 614 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms