RNA–Protein interactions for RNA: ENST00000435039.3

PCOTH-203, Transcript of Pro-X-Gly collagen triple helix like repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOTH, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOTH-203ENST00000435039 CXCR5P32302 372 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 CDR1P51861 262 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 RABGGTBP53611 331 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TAS2R40P59535 323 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 RNASE9P60153 205 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 ITIH3Q06033 890 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 DUSP4Q13115 394 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 SMC1AQ14683 1233 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 BNIPLQ7Z465 357 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 ACTRT1Q8TDG2 376 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 CENPIQ92674 756 aaPredicted RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 NT5C3BQ969T7 300 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 RBM41Q96IZ5 413 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 CAPZA3Q96KX2 299 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 CFAP57Q96MR6 1250 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TGS1Q96RS0 853 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TBCBQ99426 244 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 NAP1L3Q99457 506 aaPredicted RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TCF25Q9BQ70 676 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 C17orf80Q9BSJ5 609 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 NKX2-4Q9H2Z4 354 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 SLC28A3Q9HAS3 691 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 ENTPD7Q9NQZ7 604 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TLR9Q9NR96 1032 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 DDX56Q9NY93 547 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 YIPF1Q9Y548 306 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 ATG2AQ2TAZ0 1938 aa11.85□□□□□ -0.51
PCOTH-203ENST00000435039 TCF20Q9UGU0 1960 aaKnown RBP11.85□□□□□ -0.51
PCOTH-203ENST00000435039 CAPN9O14815 690 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 ZNF185O15231 689 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 ARHGEF15O94989 841 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 C1RP00736 705 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 MIPP30301 263 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 RDXP35241 583 aaKnown RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 PAFAH1B1P43034 410 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 SSR1P43307 286 aaKnown RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 GPR15P49685 360 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 PSEN1P49768 467 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 SULT1E1P49888 294 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 HDAC4P56524 1084 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 YWHAGP61981 247 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 PLD1Q13393 1074 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 DDR2Q16832 855 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 CDO1Q16878 200 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 C15orf59Q2T9L4 293 aaPredicted RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 OTUD1Q5VV17 481 aaPredicted RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 DAB2IPQ5VWQ8 1189 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 HFE2Q6ZVN8 426 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 TMC7Q7Z402 723 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 TCEAL8Q8IYN2 117 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 DEFB106AQ8N104 65 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 ARFGAP1Q8N6T3 406 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 EXD1Q8NHP7 514 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 SCAMP5Q8TAC9 235 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 TEKT4Q8WW24 435 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 ATXN2LQ8WWM7 1075 aaKnown RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 AUTS2Q8WXX7 1259 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 PGAP3Q96FM1 320 aaPredicted RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 NPY6RQ99463 290 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 CARD6Q9BX69 1037 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 EMILIN2Q9BXX0 1053 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 NGRNQ9NPE2 291 aaKnown RBP11.84□□□□□ -0.51
PCOTH-203ENST00000435039 ABCC13Q9NSE7 274 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 TMEM51Q9NW97 253 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 THEGQ9P2T0 379 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
PCOTH-203ENST00000435039 CTAGE15A4D2H0 777 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 SLC38A8A6NNN8 435 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 FSCN2O14926 492 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 MDM4O15151 490 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 PRPSAP2O60256 369 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CEP104O60308 925 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 SOAT2O75908 522 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 ENDOD1O94919 500 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 KRT1P04264 644 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 FYNP06241 537 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CNPP09543 421 aaKnown RBP11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CTAGE8P0CG41 777 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CSH1P0DML2 217 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CSH2P0DML3 217 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 TCF4P15884 667 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 IGFBP4P22692 258 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 YWHAQP27348 245 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 PTPN7P35236 360 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 GJC1P36383 396 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 AIF1P55008 147 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 COPS2P61201 443 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 ERVK-21P61565 698 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 ATP11AP98196 1134 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 VEPH1Q14D04 833 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CCDC85BQ15834 202 aaPredicted RBP11.83□□□□□ -0.52
PCOTH-203ENST00000435039 DCAF6Q58WW2 860 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 SDHAF4Q5VUM1 108 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 PDE12Q6L8Q7 609 aaKnown RBP11.83□□□□□ -0.52
PCOTH-203ENST00000435039 MSANTD2Q6P1R3 559 aa11.83□□□□□ -0.52
PCOTH-203ENST00000435039 CYP4V2Q6ZWL3 525 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms