RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 OLIG1Q8TAK6 271 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 FAXDC2Q96IV6 333 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 CDK5RAP1Q96SZ6 601 aaKnown RBP15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 SMOQ99835 787 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 NT5C1AQ9BXI3 368 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 SDCBP2Q9H190 292 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 SMOC1Q9H4F8 434 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 TMEM9BQ9NQ34 198 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 CYLDQ9NQC7 956 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 RXFP3Q9NSD7 469 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 WDR35Q9P2L0 1181 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 SCML2Q9UQR0 700 aa15.71■□□□□ 0.11
RPUSD3-208ENST00000433972 HELZP42694 1942 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 LNP1A1A4G5 178 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 SGK1O00141 431 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 SCAMP3O14828 347 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 TULP3O75386 442 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 HLA-DRAP01903 254 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 PMLP29590 882 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 HOXD12P35452 270 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 P2RY2P41231 377 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 ASPAP45381 313 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 DHPSP49366 369 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 SHC2P98077 582 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 TCEAL6Q6IPX3 200 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 KLHDC10Q6PID8 442 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 TMEM92Q6UXU6 159 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 SLC36A4Q6YBV0 504 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 HTR3DQ70Z44 454 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 RABEPKQ7Z6M1 372 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 C12orf40Q86WS4 652 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 BBS7Q8IWZ6 715 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 ZNF513Q8N8E2 541 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 TCEAL3Q969E4 200 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 CYFIP2Q96F07 1278 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 HNRNPABQ99729 332 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 TSG101Q99816 390 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 NUSAP1Q9BXS6 441 aaKnown RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 NIF3L1Q9GZT8 377 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 FAM124BQ9H5Z6 455 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 FAM49BQ9NUQ9 324 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 EVLQ9UI08 416 aaPredicted RBP15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 INVSQ9Y283 1065 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 STARD13Q9Y3M8 1113 aa15.7■□□□□ 0.1
RPUSD3-208ENST00000433972 PTPRDP23468 1912 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 GREB1Q4ZG55 1949 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 ANAPC1Q9H1A4 1944 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 TCRBV21S2A2A0A5A6 115 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 AP5Z1O43299 807 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 KCNK5O95279 499 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 IRF1P10914 325 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 GTF2H1P32780 548 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 PSMC2P35998 433 aaKnown RBP15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 E2F5Q15329 346 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 ST3GAL2Q16842 350 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 C10orf76Q5T2E6 689 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 N4BP2L1Q5TBK1 243 aaPredicted RBP15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 GRAMD4Q6IC98 578 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 FAM186BQ8IYM0 893 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 NAT16Q8N8M0 369 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 C12orf29Q8N999 325 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 ZMIZ2Q8NF64 920 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 SPATA20Q8TB22 786 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 HMGB4Q8WW32 186 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 DNAJC17Q9NVM6 304 aaKnown RBP15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 DNMT3LQ9UJW3 386 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 ZNF510Q9Y2H8 683 aa15.69■□□□□ 0.1
RPUSD3-208ENST00000433972 C4orf47A7E2U8 309 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 STX10O60499 249 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 ZNF217O75362 1048 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 BEST1O76090 585 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 RALAP11233 206 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 ACO1P21399 889 aaKnown RBP15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 BCKDHBP21953 392 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 ADORA2BP29275 332 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 NTSR1P30989 418 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 PLA2G4AP47712 749 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 NOVA1P51513 510 aaKnown RBP15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 SLC8A3P57103 927 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 LYSMD4Q5XG99 296 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 PSAPL1Q6NUJ1 521 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 CLEC20AQ6ZU45 233 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 TMEM25Q86YD3 366 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 SYT12Q8IV01 421 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 PHTF2Q8N3S3 785 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 PIGKQ92643 395 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 BBS2Q9BXC9 721 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 TMEM8AQ9HCN3 771 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 MARK1Q9P0L2 795 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 HMGXB4Q9UGU5 601 aa15.68■□□□□ 0.1
RPUSD3-208ENST00000433972 NEDD8-MDP1E9PL57 170 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 PSMA7O14818 248 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 CACNG3O60359 315 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 ADAM23O75077 832 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 HOXB2P14652 356 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 GCLMP48507 274 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 ORC1Q13415 861 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 ADAM9Q13443 819 aa15.67■□□□□ 0.1
RPUSD3-208ENST00000433972 COBLL1Q53SF7 1204 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms