RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 RASA2Q15283 850 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 HIF1AQ16665 826 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 CCDC142Q17RM4 750 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 GKAP1Q5VSY0 366 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-209ENST00000433949 SLC26A9Q7LBE3 791 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 LIMS2Q7Z4I7 341 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 CPLX4Q7Z7G2 160 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 TDRPQ86YL5 185 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 SMG8Q8ND04 991 aaKnown RBP12.45□□□□□ -0.42
CTCFL-209ENST00000433949 DBF4BQ8NFT6 615 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 SPATA18Q8TC71 538 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 ATXN2LQ8WWM7 1075 aaKnown RBP12.45□□□□□ -0.42
CTCFL-209ENST00000433949 PRCCQ92733 491 aaPredicted RBP12.45□□□□□ -0.42
CTCFL-209ENST00000433949 HSFY1Q96LI6 401 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 PEBP4Q96S96 227 aa12.45□□□□□ -0.42
CTCFL-209ENST00000433949 CFAP69A5D8W1 941 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 CLTBP09497 229 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 ETS1P14921 441 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 ITGB8P26012 769 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 PHBP35232 272 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 RGS7P49802 495 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 ARL4CP56559 192 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 SLC8A3P57103 927 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 DPYSL3Q14195 570 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 KRT81Q14533 505 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 CYP4V2Q6ZWL3 525 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-209ENST00000433949 PRUNE1Q86TP1 453 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 HACE1Q8IYU2 909 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 TOP6BLQ8N6T0 577 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 MDM1Q8TC05 714 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 ZFP42Q96MM3 310 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 TOX2Q96NM4 488 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 RNF157Q96PX1 679 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 ZNF670Q9BS34 389 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 FAM105AQ9NUU6 356 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 FETUBQ9UGM5 382 aa12.44□□□□□ -0.42
CTCFL-209ENST00000433949 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 EXOC1LA0A1B0GW35 172 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 PAPSS1O43252 624 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 LRPAP1P30533 357 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 AFF1P51825 1210 aaKnown RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 ROR1Q01973 937 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 CDO1Q16878 200 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 C15orf59Q2T9L4 293 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TRNP1Q6NT89 227 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TADA2BQ86TJ2 420 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 RTN4RL1Q86UN2 441 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 SCUBE3Q8IX30 993 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 FAM172AQ8WUF8 416 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 KBTBD7Q8WVZ9 684 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 PIWIL1Q96J94 861 aaKnown RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 PWWP2AQ96N64 755 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 SEZ6LQ9BYH1 1024 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 NSRP1Q9H0G5 558 aaKnown RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 NGRNQ9NPE2 291 aaKnown RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 UBN1Q9NPG3 1134 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 EURLQ9NYK6 297 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 SENP1Q9P0U3 644 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 SAE1Q9UBE0 346 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TRIM43BA6NCK2 446 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TSHRP16473 764 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TAF5Q15542 800 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TCTN1Q2MV58 587 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 PPP1R21Q6ZMI0 780 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 ZBED8Q8IZ13 594 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 CACNA2D3Q8IZS8 1091 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 NAT8LQ8N9F0 302 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 TRIM43Q96BQ3 446 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 ZNF317Q96PQ6 595 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 FRMD8Q9BZ67 464 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-209ENST00000433949 SLC38A7Q9NVC3 462 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 NAALADL1Q9UQQ1 740 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 NME7Q9Y5B8 376 aa12.43□□□□□ -0.42
CTCFL-209ENST00000433949 PIK3R2O00459 728 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 APOL1O14791 398 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 GRAP2O75791 330 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 WARSP23381 471 aaKnown RBP12.42□□□□□ -0.42
CTCFL-209ENST00000433949 RPL22P35268 128 aaKnown RBP12.42□□□□□ -0.42
CTCFL-209ENST00000433949 GDF10P55107 478 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 LILRA4P59901 499 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 ATP11AP98196 1134 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 PDIA2Q13087 525 aaKnown RBP12.42□□□□□ -0.42
CTCFL-209ENST00000433949 EFHC1Q5JVL4 640 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 SH3PXD2AQ5TCZ1 1133 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 SCYL2Q6P3W7 929 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 C4orf22Q6V702 233 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 ARHGEF18Q6ZSZ5 1173 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 ADGRF2Q8IZF7 708 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 PDIK1LQ8N165 341 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 ATP11CQ8NB49 1132 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 CPT1BQ92523 772 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 CENPIQ92674 756 aaPredicted RBP12.42□□□□□ -0.42
CTCFL-209ENST00000433949 KHSRPQ92945 711 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTCFL-209ENST00000433949 PRDM16Q9HAZ2 1276 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 CHST12Q9NRB3 414 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 SLC24A2Q9UI40 661 aa12.42□□□□□ -0.42
CTCFL-209ENST00000433949 RANBP2P49792 3224 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms