RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 MDM4O15151 490 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 LTFP02788 710 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 HMBSP08397 361 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 TPM1P09493 284 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 KPNA1P52294 538 aaPredicted RBP16.27■□□□□ 0.2
TREX1-201ENST00000433541 SLC7A9P82251 487 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 CDR2Q01850 454 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 NAA35Q5VZE5 725 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 BSPRYQ5W0U4 402 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 PM20D1Q6GTS8 502 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 SCD5Q86SK9 330 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 SIX5Q8N196 739 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 TTC8Q8TAM2 541 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 IRGQQ8WZA9 623 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 CYLDQ9NQC7 956 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 GKN1Q9NS71 199 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 ABCC13Q9NSE7 274 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
TREX1-201ENST00000433541 DUS2Q9NX74 493 aaKnown RBP16.27■□□□□ 0.2
TREX1-201ENST00000433541 CLIC5Q9NZA1 410 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 CYTH4Q9UIA0 394 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 LSM7Q9UK45 103 aaKnown RBP16.27■□□□□ 0.2
TREX1-201ENST00000433541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.2
TREX1-201ENST00000433541 TMEM221A6NGB7 291 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 M0R296 226 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 CHADO15335 359 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 LSM8O95777 96 aaKnown RBP16.26■□□□□ 0.19
TREX1-201ENST00000433541 FCHO2Q0JRZ9 810 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 USP4Q13107 963 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 ZNF77Q15935 545 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 TDRD12Q587J7 1177 aaKnown RBP16.26■□□□□ 0.19
TREX1-201ENST00000433541 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 CPA5Q8WXQ8 436 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 IQCDQ96DY2 449 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 CPXM1Q96SM3 734 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 TRIM62Q9BVG3 475 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 RBSNQ9H1K0 784 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 ARHGEF3Q9NR81 526 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 SLC2A4RGQ9NR83 387 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 HEBP1Q9NRV9 189 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 MARCH2Q9P0N8 246 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 NOCTQ9UK39 431 aaKnown RBP16.26■□□□□ 0.19
TREX1-201ENST00000433541 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 WNT6Q9Y6F9 365 aa16.26■□□□□ 0.19
TREX1-201ENST00000433541 MIA3Q5JRA6 1907 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 SLC12A8A0AV02 714 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 OLFM2O95897 454 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 NCAM1P13591 858 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 KLHL30Q0D2K2 578 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 TRIM68Q6AZZ1 485 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 TRIM72Q6ZMU5 477 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 TOGARAM2Q6ZUX3 1019 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 SCML4Q8N228 414 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 FLCNQ8NFG4 579 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 DDX1Q92499 740 aaKnown RBP16.25■□□□□ 0.19
TREX1-201ENST00000433541 BAP1Q92560 729 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 DNASE1L2Q92874 299 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 SHDQ96IW2 340 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 LRRC3BQ96PB8 259 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 C1QTNF1Q9BXJ1 281 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 SLC4A5Q9BY07 1137 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 EBF3Q9H4W6 596 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 WNT16Q9UBV4 365 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 TJP2Q9UDY2 1190 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 LUC7L2Q9Y383 392 aaKnown RBP16.25■□□□□ 0.19
TREX1-201ENST00000433541 TECTAO75443 2155 aa16.25■□□□□ 0.19
TREX1-201ENST00000433541 MYOFQ9NZM1 2061 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
TREX1-201ENST00000433541 GABBR2O75899 941 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 ERBB2P04626 1255 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 TNFAIP3P21580 790 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
TREX1-201ENST00000433541 FMO1Q01740 532 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 TNK2Q07912 1038 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 TRIM14Q14142 442 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 PDGFRLQ15198 375 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 MLF2Q15773 248 aaPredicted RBP16.24■□□□□ 0.19
TREX1-201ENST00000433541 ITPRIPL2Q3MIP1 535 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 PTPN20Q4JDL3 420 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 SLC44A4Q53GD3 710 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 FIGNQ5HY92 759 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 SPECC1LQ69YQ0 1117 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 TPRG1Q6ZUI0 275 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 HFE2Q6ZVN8 426 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 FAM183BPQ6ZVS7 135 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 TMEM110Q86TL2 294 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 CPA6Q8N4T0 437 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 WDTC1Q8N5D0 677 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 ATP2A3Q93084 1043 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 PBXIP1Q96AQ6 731 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 AGPAT1Q99943 283 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 EDEM3Q9BZQ6 932 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 NUCKS1Q9H1E3 243 aaKnown RBP16.24■□□□□ 0.19
TREX1-201ENST00000433541 GTSE1Q9NYZ3 720 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 SFMBT1Q9UHJ3 866 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 PIAS3Q9Y6X2 628 aa16.24■□□□□ 0.19
TREX1-201ENST00000433541 ITIH6Q6UXX5 1313 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 A0A1W2PQJ5 194 aa16.23■□□□□ 0.19
TREX1-201ENST00000433541 GOLGA8SH3BPF8 625 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms