RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 CYP27C1Q4G0S4 372 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CEP55Q53EZ4 464 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ARSHQ5FYA8 562 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ATAD3BQ5T9A4 648 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 C1orf146Q5VVC0 180 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 PAOXQ6QHF9 649 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 RIC3Q7Z5B4 369 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ZSWIM9Q86XI8 627 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 COL23A1Q86Y22 540 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 C2CD5Q86YS7 1000 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 SCUBE3Q8IX30 993 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ADGRG2Q8IZP9 1017 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 BEND7Q8N7W2 519 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 IPMKQ8NFU5 416 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CHAC2Q8WUX2 184 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 APBA2Q99767 749 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 C7orf25Q9BPX7 421 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CLSTN3Q9BQT9 956 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 TEX13BQ9BXU2 312 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 CADM1Q9BY67 442 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 NT5C3AQ9H0P0 336 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 IARS2Q9NSE4 1012 aaKnown RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 KBTBD4Q9NVX7 518 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ACTR3BQ9P1U1 418 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 ERVK-19Q9WJR5 959 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 GMPPBQ9Y5P6 360 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 HEMK1Q9Y5R4 338 aaPredicted RBP11.3□□□□□ -0.6
CCDC171-202ENST00000432954 MED23Q9ULK4 1368 aa11.3□□□□□ -0.6
CCDC171-202ENST00000432954 TCP11X1B4DZS4 312 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 K7ENM7 598 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A9O60656 530 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 NDUFS2O75306 463 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 BPNT1O95861 308 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 GLAP06280 429 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 C8BP07358 591 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 WEE2P0C1S8 567 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 CCDC130P13994 396 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A6P19224 532 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 CCNA2P20248 432 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 ITGALP20701 1170 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A1P22309 533 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A4P22310 534 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 TRHRP34981 398 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-202ENST00000432954 IDUAP35475 653 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A3P35503 534 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A5P35504 534 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 GRIK1P39086 918 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 NPTX2P47972 431 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 ALDH3B2P48448 385 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 ARHGAP4P98171 946 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 KRT32Q14532 448 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 RRS1Q15050 365 aaKnown RBP11.29□□□□□ -0.6
CCDC171-202ENST00000432954 TSC22D1Q15714 1073 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 CCNG2Q16589 344 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 HSP90AA4PQ58FG1 418 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 CCDC149Q6ZUS6 474 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 KRT26Q7Z3Y9 468 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 XAGE3Q8WTP9 111 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 SEPT8Q92599 483 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 TUBB6Q9BUF5 446 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 USP44Q9H0E7 712 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 TMEM245Q9H330 911 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 SLA2Q9H6Q3 261 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A7Q9HAW7 530 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A10Q9HAW8 530 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 UGT1A8Q9HAW9 530 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 VPS45Q9NRW7 570 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 SUCOQ9UBS9 1254 aaKnown RBP11.29□□□□□ -0.6
CCDC171-202ENST00000432954 BCAP29Q9UHQ4 241 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 DUSP12Q9UNI6 340 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 INO80Q9ULG1 1556 aaPredicted RBP11.29□□□□□ -0.6
CCDC171-202ENST00000432954 AOX1Q06278 1338 aa11.29□□□□□ -0.6
CCDC171-202ENST00000432954 EIF2AK4Q9P2K8 1649 aaKnown RBP11.29□□□□□ -0.6
CCDC171-202ENST00000432954 N4BP2Q86UW6 1770 aaPredicted RBP11.28□□□□□ -0.6
CCDC171-202ENST00000432954 ERVK-7P63135 1459 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 RFX7Q2KHR2 1363 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 NDUFS6O75380 124 aaKnown RBP11.28□□□□□ -0.6
CCDC171-202ENST00000432954 STAU1O95793 577 aaKnown RBP11.28□□□□□ -0.6
CCDC171-202ENST00000432954 ZNF23P17027 643 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 NR4A2P43354 598 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 CCR10P46092 362 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 CDK16Q00536 496 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 GCNT1Q02742 428 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 PPARDQ03181 441 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 PPARAQ07869 468 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 GALNT3Q14435 633 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 MTFR1Q15390 333 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 MMEL1Q495T6 779 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 GTDC1Q4AE62 458 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 PPM1LQ5SGD2 360 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 TPGS2Q68CL5 300 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 SWSAP1Q6NVH7 229 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 APTXQ7Z2E3 356 aaKnown RBP11.28□□□□□ -0.6
CCDC171-202ENST00000432954 ADCK1Q86TW2 530 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 GLYCTKQ8IVS8 523 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 CLIP4Q8N3C7 705 aa11.28□□□□□ -0.6
CCDC171-202ENST00000432954 NEDD1Q8NHV4 660 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms