RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 GRM5P41594 1212 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 BST2Q10589 180 aaKnown RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 CCDC14Q49A88 953 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 PDZD4Q76G19 769 aaPredicted RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 MCUR1Q96AQ8 359 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 SLCO1B3Q9NPD5 702 aa11.85□□□□□ -0.51
CLDN4-202ENST00000431918 SMG5Q9UPR3 1016 aaKnown RBP11.85□□□□□ -0.51
CLDN4-202ENST00000431918 ATP9BO43861 1147 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 SNAI1O95863 264 aaPredicted RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 PGK1P00558 417 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 LMO2P25791 158 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 RPA3P35244 121 aaPredicted RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 ZNF132P52740 706 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CDC42EP1Q00587 391 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 TAPT1Q6NXT6 567 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 KDELC2Q7Z4H8 507 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 POLNQ7Z5Q5 900 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 USP33Q8TEY7 942 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 SPOCK2Q92563 424 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 EDEM1Q92611 657 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 LPPQ93052 612 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 ATP2A3Q93084 1043 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 PCMTD2Q9NV79 361 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 PHIPQ8WWQ0 1821 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 IGKV6-21A0A0C4DH24 114 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 ITKQ08881 620 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 KLF1Q13351 362 aaPredicted RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 ANKRD20A8PQ5CZ79 823 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 WSCD1Q658N2 575 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 NPLOC4Q8TAT6 608 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 RNF157Q96PX1 679 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 RNF39Q9H2S5 420 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.84□□□□□ -0.511e-6■■■□□ 14.9
CLDN4-202ENST00000431918 SENP1Q9P0U3 644 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 PHTF1Q9UMS5 762 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 NRCAMQ92823 1304 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 H3BRJ5 948 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 POMCP01189 267 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CCL14Q16627 93 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 FNBP1LQ5T0N5 605 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 KCNT2Q6UVM3 1135 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 RIBC1Q8N443 379 aaPredicted RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CPT1BQ92523 772 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 EPB41L4BQ9H329 900 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 UBN1Q9NPG3 1134 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 SMYD2Q9NRG4 433 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 KRT82Q9NSB4 513 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 DDIT4Q9NX09 232 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 KRT38O76015 456 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 FAM200BP0CF97 657 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 ADRA1DP25100 572 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 THPOP40225 353 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 ERFP50548 548 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CRADDP78560 199 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 PDK2Q15119 407 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 KBTBD12Q3ZCT8 623 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 CFAP157Q5JU67 520 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 LCLAT1Q6UWP7 414 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 PIGZQ86VD9 579 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 TMEM174Q8WUU8 243 aa11.84□□□□□ -0.51
CLDN4-202ENST00000431918 DDX43Q9NXZ2 648 aaKnown RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 G3BP2Q9UN86 482 aaKnown RBP11.84□□□□□ -0.51
CLDN4-202ENST00000431918 DNAJC25-GNG10A0A024R161 153 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 SMIM28A0A1B0GU29 152 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 TCRBV7S3A2A0A539 114 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 KLHL33A6NCF5 533 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 KCNK1O00180 336 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 SESN3P58005 492 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 TPI1P60174 286 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 EFHC1Q5JVL4 640 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 ARMC3Q5W041 872 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 TCP10LQ8TDR4 215 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 APOL2Q9BQE5 337 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 C16orf70Q9BSU1 422 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 MAF1Q9H063 256 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 VPS11Q9H270 941 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 SUDS3Q9H7L9 328 aaPredicted RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 SETSIPP0DME0 302 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 PYGBP11216 843 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 DARSP14868 501 aaKnown RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 MLH1P40692 756 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 TKTL1P51854 596 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 FSCN1Q16658 493 aaKnown RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 CA9Q16790 459 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 ZNF792Q3KQV3 632 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 LRRC6Q86X45 466 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 PRCCQ92733 491 aaPredicted RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 UPF1Q92900 1129 aaKnown RBP eCLIP11.83□□□□□ -0.523e-14■■■■■ 90.9
CLDN4-202ENST00000431918 NKD2Q969F2 451 aaPredicted RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 ZMAT2Q96NC0 199 aaKnown RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 KATNAL1Q9BW62 490 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 TRIM55Q9BYV6 548 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 CFAP69A5D8W1 941 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 EEF2KO00418 725 aaKnown RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 SNX3O60493 162 aa11.83□□□□□ -0.52
CLDN4-202ENST00000431918 ZFXP17010 805 aaPredicted RBP11.83□□□□□ -0.52
CLDN4-202ENST00000431918 GBE1Q04446 702 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms